Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g02151 ATGGGGAGCCAAAGAGTTGAAGAAACTGGTCCTTCATCCCACTATCATCATCACCTTCCATATAATTCACTTCTTTATGGAATCAACAACAATAATCTTTCCTCCACTTTGATCAATCACGATGGACAATCTTTTGATTTTGGAGAATTGGAACAAGCAATTGTGCTACAAGGACTCGGAACCAAGAACAAACTCGATCATCACGAACCTAAACAAAGCTTTTTCTCAGGCAAGCCTGCAGCAACTCTGGAAATGTTTCCTTCTTGGCCAATCAAACACCAACAAACTTCAAGAGGAATTAGTTTGAGAAGAAGAGAAGAGAGCAGTGATGAGTCAGGAGCAGCTGTGAACACTCATACAATAAACAAATCTAATAATCAAGAAGGGCATTTGGAATTGGAAATAGAAAAAGAAGAATCTGAGATGAGTAAAAAGGGTTGTTGTTCATCTTCTTCTTCAGGTCAAGATCAGAGCTTTATTCAAAAGCATCTACAGCAGATTCAACCTGAAATGATACTCAGTGATATTTCAACAACTGCACTTTCATCTCAACATCAATCCCTTCAACAAAAGAGAAAAGGATGTGGTTCCATTTCAACATCACAGAAACAACTTGACGCTAAGACATTGAGACGTTTAGCTCAGAACAGAGAGGCTGCGAGGAAGAGTCGACTAAGGAAAAAGGCTTACGTACAGCAACTCGAGAGCAGTAGAATCAAGCTTACGCAGCTTGAGCAGGACCTTCAACGGGCACGATCTCAGGGTTTGTTTTTAGGTGCCGGCGGTACTGGCGGCGGCATTGTCAGCCCCGCTAGTGCAATTTTTGATATGGAATATGTAAGGTGGTTGGAAGAGGACCATCGACATACAGTGGAGCTGCGTGGGGGACTAGAGGCACATCTGCCTGACGTGGATTTGAGAGTGAGAGTAGATGCATGCATTTGCCATTACAACGAAATTTTTCGACTCAAAGGAGAGGCTGCTAAGTCCGACATCTTCCATCTCATCACCGGAATCTGGATGTCTCCGGCGGAGCGTTGTTTCCTCTGGATCGGTGGATTTCGACCCTCCGATCTCATCAAGATGTTAATGTCACAATTGGATCCAATAACAGAACAACAAGTGATGGAGATTTACAAGCTACAACATTCGTCACAACAAGCTGAAGATGCTTTATCTCAAGGACTTGATCAGCTCCATCGGTCTTTGACCGACATCATCGCCGGCGGTCCGATCATCGACGGCATCAACCACATGGTTTTGGCCATGGACAAGCTCTCTAGTCTCCAAGGCTTTCTCCATCAGGCAGATATTTTAAGACAACAAACGCTTCATCGACTATGTAGGATACTCACGGTTCGACAAGCGGCCAAATGTTTTCTAATCATTGGTGAATATTACAGTAGATTACGAGCTCTAAGCTCCCTATGGTCCTCTCGTCCAAAGGAGGATGAAGATAATTCAAGCCAAACAAGTTTGCATCAACAAGTCCATATGGTTCAACCCTCGCACCATCACTTCTCAAGCTTCTAA 1533 43.64 MGSQRVEETGPSSHYHHHLPYNSLLYGINNNNLSSTLINHDGQSFDFGELEQAIVLQGLGTKNKLDHHEPKQSFFSGKPAATLEMFPSWPIKHQQTSRGISLRRREESSDESGAAVNTHTINKSNNQEGHLELEIEKEESEMSKKGCCSSSSSGQDQSFIQKHLQQIQPEMILSDISTTALSSQHQSLQQKRKGCGSISTSQKQLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQDLQRARSQGLFLGAGGTGGGIVSPASAIFDMEYVRWLEEDHRHTVELRGGLEAHLPDVDLRVRVDACICHYNEIFRLKGEAAKSDIFHLITGIWMSPAERCFLWIGGFRPSDLIKMLMSQLDPITEQQVMEIYKLQHSSQQAEDALSQGLDQLHRSLTDIIAGGPIIDGINHMVLAMDKLSSLQGFLHQADILRQQTLHRLCRILTVRQAAKCFLIIGEYYSRLRALSSLWSSRPKEDEDNSSQTSLHQQVHMVQPSHHHFSSF 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 36609167 36616585 + ClCG02G022140.2 Cla02g02151 268277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g02151 510 MobiDBLite consensus disorder prediction 145 159 - -
Cla02g02151 510 PANTHER TRANSCRIPTION FACTOR TGA9 71 490 - -
Cla02g02151 510 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 211 226 IPR004827 GO:0003700|GO:0006355
Cla02g02151 510 SMART brlzneu 204 281 IPR004827 GO:0003700|GO:0006355
Cla02g02151 510 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 206 250 IPR004827 GO:0003700|GO:0006355
Cla02g02151 510 ProSiteProfiles DOG1 domain profile. 272 480 IPR025422 GO:0006351|GO:0043565
Cla02g02151 510 MobiDBLite consensus disorder prediction 129 144 - -
Cla02g02151 510 MobiDBLite consensus disorder prediction 113 128 - -
Cla02g02151 510 SUPERFAMILY Leucine zipper domain 208 251 IPR046347 GO:0003700|GO:0006355
Cla02g02151 510 MobiDBLite consensus disorder prediction 94 159 - -
Cla02g02151 510 Coils Coil 227 254 - -
Cla02g02151 510 MobiDBLite consensus disorder prediction 481 510 - -
Cla02g02151 510 Pfam bZIP transcription factor 207 249 IPR004827 GO:0003700|GO:0006355
Cla02g02151 510 Gene3D - 207 256 - -
Cla02g02151 510 MobiDBLite consensus disorder prediction 490 510 - -
Cla02g02151 510 Pfam Seed dormancy control 291 365 IPR025422 GO:0006351|GO:0043565
Cla02g02151 510 PANTHER TRANSCRIPTION FACTOR TGA9 71 490 - -
Cla02g02151 510 Coils Coil 121 141 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01215 Cla-Chr1:22588332 Cla02g02151 Cla-Chr2:36609167 6.53E-175 dispersed
Cla02g02151 Cla-Chr2:36609167 Cla05g02693 Cla-Chr5:38147657 1.02E-114 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
60738 PF14144 DOG1 1.70E-27 No_clan Cla TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g02151 K14431 - csv:101223216 668.307