Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g02151 | ATGGGGAGCCAAAGAGTTGAAGAAACTGGTCCTTCATCCCACTATCATCATCACCTTCCATATAATTCACTTCTTTATGGAATCAACAACAATAATCTTTCCTCCACTTTGATCAATCACGATGGACAATCTTTTGATTTTGGAGAATTGGAACAAGCAATTGTGCTACAAGGACTCGGAACCAAGAACAAACTCGATCATCACGAACCTAAACAAAGCTTTTTCTCAGGCAAGCCTGCAGCAACTCTGGAAATGTTTCCTTCTTGGCCAATCAAACACCAACAAACTTCAAGAGGAATTAGTTTGAGAAGAAGAGAAGAGAGCAGTGATGAGTCAGGAGCAGCTGTGAACACTCATACAATAAACAAATCTAATAATCAAGAAGGGCATTTGGAATTGGAAATAGAAAAAGAAGAATCTGAGATGAGTAAAAAGGGTTGTTGTTCATCTTCTTCTTCAGGTCAAGATCAGAGCTTTATTCAAAAGCATCTACAGCAGATTCAACCTGAAATGATACTCAGTGATATTTCAACAACTGCACTTTCATCTCAACATCAATCCCTTCAACAAAAGAGAAAAGGATGTGGTTCCATTTCAACATCACAGAAACAACTTGACGCTAAGACATTGAGACGTTTAGCTCAGAACAGAGAGGCTGCGAGGAAGAGTCGACTAAGGAAAAAGGCTTACGTACAGCAACTCGAGAGCAGTAGAATCAAGCTTACGCAGCTTGAGCAGGACCTTCAACGGGCACGATCTCAGGGTTTGTTTTTAGGTGCCGGCGGTACTGGCGGCGGCATTGTCAGCCCCGCTAGTGCAATTTTTGATATGGAATATGTAAGGTGGTTGGAAGAGGACCATCGACATACAGTGGAGCTGCGTGGGGGACTAGAGGCACATCTGCCTGACGTGGATTTGAGAGTGAGAGTAGATGCATGCATTTGCCATTACAACGAAATTTTTCGACTCAAAGGAGAGGCTGCTAAGTCCGACATCTTCCATCTCATCACCGGAATCTGGATGTCTCCGGCGGAGCGTTGTTTCCTCTGGATCGGTGGATTTCGACCCTCCGATCTCATCAAGATGTTAATGTCACAATTGGATCCAATAACAGAACAACAAGTGATGGAGATTTACAAGCTACAACATTCGTCACAACAAGCTGAAGATGCTTTATCTCAAGGACTTGATCAGCTCCATCGGTCTTTGACCGACATCATCGCCGGCGGTCCGATCATCGACGGCATCAACCACATGGTTTTGGCCATGGACAAGCTCTCTAGTCTCCAAGGCTTTCTCCATCAGGCAGATATTTTAAGACAACAAACGCTTCATCGACTATGTAGGATACTCACGGTTCGACAAGCGGCCAAATGTTTTCTAATCATTGGTGAATATTACAGTAGATTACGAGCTCTAAGCTCCCTATGGTCCTCTCGTCCAAAGGAGGATGAAGATAATTCAAGCCAAACAAGTTTGCATCAACAAGTCCATATGGTTCAACCCTCGCACCATCACTTCTCAAGCTTCTAA | 1533 | 43.64 | MGSQRVEETGPSSHYHHHLPYNSLLYGINNNNLSSTLINHDGQSFDFGELEQAIVLQGLGTKNKLDHHEPKQSFFSGKPAATLEMFPSWPIKHQQTSRGISLRRREESSDESGAAVNTHTINKSNNQEGHLELEIEKEESEMSKKGCCSSSSSGQDQSFIQKHLQQIQPEMILSDISTTALSSQHQSLQQKRKGCGSISTSQKQLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQDLQRARSQGLFLGAGGTGGGIVSPASAIFDMEYVRWLEEDHRHTVELRGGLEAHLPDVDLRVRVDACICHYNEIFRLKGEAAKSDIFHLITGIWMSPAERCFLWIGGFRPSDLIKMLMSQLDPITEQQVMEIYKLQHSSQQAEDALSQGLDQLHRSLTDIIAGGPIIDGINHMVLAMDKLSSLQGFLHQADILRQQTLHRLCRILTVRQAAKCFLIIGEYYSRLRALSSLWSSRPKEDEDNSSQTSLHQQVHMVQPSHHHFSSF | 510 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 36609167 | 36616585 | + | ClCG02G022140.2 | Cla02g02151 | 268277 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g02151 | 510 | MobiDBLite | consensus disorder prediction | 145 | 159 | - | - | |
Cla02g02151 | 510 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 71 | 490 | - | - | |
Cla02g02151 | 510 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 211 | 226 | IPR004827 | GO:0003700|GO:0006355 | |
Cla02g02151 | 510 | SMART | brlzneu | 204 | 281 | IPR004827 | GO:0003700|GO:0006355 | |
Cla02g02151 | 510 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 206 | 250 | IPR004827 | GO:0003700|GO:0006355 | |
Cla02g02151 | 510 | ProSiteProfiles | DOG1 domain profile. | 272 | 480 | IPR025422 | GO:0006351|GO:0043565 | |
Cla02g02151 | 510 | MobiDBLite | consensus disorder prediction | 129 | 144 | - | - | |
Cla02g02151 | 510 | MobiDBLite | consensus disorder prediction | 113 | 128 | - | - | |
Cla02g02151 | 510 | SUPERFAMILY | Leucine zipper domain | 208 | 251 | IPR046347 | GO:0003700|GO:0006355 | |
Cla02g02151 | 510 | MobiDBLite | consensus disorder prediction | 94 | 159 | - | - | |
Cla02g02151 | 510 | Coils | Coil | 227 | 254 | - | - | |
Cla02g02151 | 510 | MobiDBLite | consensus disorder prediction | 481 | 510 | - | - | |
Cla02g02151 | 510 | Pfam | bZIP transcription factor | 207 | 249 | IPR004827 | GO:0003700|GO:0006355 | |
Cla02g02151 | 510 | Gene3D | - | 207 | 256 | - | - | |
Cla02g02151 | 510 | MobiDBLite | consensus disorder prediction | 490 | 510 | - | - | |
Cla02g02151 | 510 | Pfam | Seed dormancy control | 291 | 365 | IPR025422 | GO:0006351|GO:0043565 | |
Cla02g02151 | 510 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 71 | 490 | - | - | |
Cla02g02151 | 510 | Coils | Coil | 121 | 141 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g01215 | Cla-Chr1:22588332 | Cla02g02151 | Cla-Chr2:36609167 | 6.53E-175 | dispersed | |
Cla02g02151 | Cla-Chr2:36609167 | Cla05g02693 | Cla-Chr5:38147657 | 1.02E-114 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
60738 | PF14144 | DOG1 | 1.70E-27 | No_clan | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g02151 | K14431 | - | csv:101223216 | 668.307 |