Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g02157 CAAACACGAGAGATAATTAATACCAAAGAAACAAAGAAAGAAAGAAGGAAAGAAGAGCAAAGGCACAGGAAATCGTCTGGAACTTTCTTCCAGACCCAAAAGGAATCTCCAAAGAGCTCACAACCGCCCTTTCCCCTCTTGTCGTTTCTGCTGATTCAATCATCGCAAACAGATCCGAAAAGGATGGCGGAAGAACATAGATGCCAAGCGCCGAAACTTTGCGTTAATAACTGTGGATTCTTCGGGAGTCCGGCGACTCAAGATCTCTGTTCAAAATGTTACCGAGATCTGCAGTTAAAGGAACAACAATCCTCCTCCGCTAAACTCGCCTTAAACCAAACCCTAACATCCGCCGCCTCATCGTCCTTTGCGGATGCGGCGTTGTTAAATCCGAAACCGGCTTCATCGGAAGCGAACCAACCTCTGGCGGAGACGAGGACGGAAGTGGTTCCGACGCCGGCGGCAACACAGCAGCAGCCGAGCCGATGTACGACGTGCAGGCGGCGCGTGGGGTTGACGGGGTTCCAGTGCAGGTGCGGGATGGTGTACTGTGGGACTCACCGGTACCCGGAGCAACACGGTTGCGAATTTGACTTCAAGCGGATGGGGAAGGAGCAGATCGCGAAGGCGAATCCGGTGGTGAAAGGGGAGAAACTGCAGAAGATC 666 52.4 QTREIINTKETKKERRKEEQRHRKSSGTFFQTQKESPKSSQPPFPLLSFLLIQSSQTDPKRMAEEHRCQAPKLCVNNCGFFGSPATQDLCSKCYRDLQLKEQQSSSAKLALNQTLTSAASSSFADAALLNPKPASSEANQPLAETRTEVVPTPAATQQQPSRCTTCRRRVGLTGFQCRCGMVYCGTHRYPEQHGCEFDFKRMGKEQIAKANPVVKGEKLQKI 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 36656128 36657082 - ClCG02G022200.1 Cla02g02157 268283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g02157 222 SUPERFAMILY AN1-like Zinc finger 150 217 IPR035896 -
Cla02g02157 222 PANTHER AN1-TYPE ZINC FINGER PROTEIN 62 222 - -
Cla02g02157 222 MobiDBLite consensus disorder prediction 1 25 - -
Cla02g02157 222 MobiDBLite consensus disorder prediction 1 42 - -
Cla02g02157 222 Gene3D - 134 218 IPR035896 -
Cla02g02157 222 ProSiteProfiles Zinc finger A20-type profile. 68 102 IPR002653 GO:0003677|GO:0008270
Cla02g02157 222 SMART A20_3 71 95 IPR002653 GO:0003677|GO:0008270
Cla02g02157 222 ProSiteProfiles Zinc finger AN1-type profile. 157 203 IPR000058 GO:0008270
Cla02g02157 222 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 62 222 - -
Cla02g02157 222 SMART AN1_Zf_4 163 200 IPR000058 GO:0008270
Cla02g02157 222 Pfam AN1-like Zinc finger 163 199 IPR000058 GO:0008270
Cla02g02157 222 MobiDBLite consensus disorder prediction 26 42 - -
Cla02g02157 222 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 73 117 - -
Cla02g02157 222 Pfam A20-like zinc finger 73 95 IPR002653 GO:0003677|GO:0008270
Cla02g02157 222 Gene3D - 61 122 - -
Cla02g02157 222 MobiDBLite consensus disorder prediction 133 154 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g02157 Cla-Chr2:36656128 Cla09g00395 Cla-Chr9:3806647 3.21E-46 dispersed
Cla02g02157 Cla-Chr2:36656128 Cla01g00337 Cla-Chr1:3627240 4.15E-47 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g02157 - - csv:101219115 255.758