Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g02176 | ATGGCGACGTACTTTCACGGTGGTTCAGAAATCCAAGCGAATTCTGACGGAATTCATACTCTTTACCTTATGAACCCAAATTACGTACCTTACTCTGACACCCACTCTCAAACGCCTCCCAATATGCTCTTTCTCAACTCTTCTTCAACTCACGCGCTTAACCCTTCAACTCTTCCTCACGCGCCGCCTTCCAACAACCACTTCGTCGGAATTCCCCTCCCGACCACCGACAATCCTCGTCCATCCTACCACGAAATCTCAACCCTCCATCCGATGCCACCTCACCGCCTCCACTACAATCTATGGGCTCCTATGGACCAACAACCCGATCACGGAATTTCCGGCGATTCCGCCGATTTGACCTTCCGCCGCCCCACCACACAACAAGGTTTGTCCTTAAGCCTCTCCTCCCAACAATCGCTTTACCGGACACTCTCGGCCGAGCAGGAGATTCAAGGCGGCGGCGGCGGTGCTCCAAGTGGGGAGGAAATTCGGGTGTCGGGAAATTCACCGACGTCGGTGTCGGTGGTGTCGAGTGGAATAACGGGCGTTCAAAGCGTGATATTGGGGTCTAAGTACTTGAAAGCGGCTCAAGAACTTTTGGATGAAGTGGTTCATGTTGGCAAAGGAAATTTTAAATCCGACAAAGGGGATGGGACAAAGGACAAGATGAAGATGAAGAAAGAATCCATGGCTACGATTGGTGGAGACCCTTCCGCCTCCGTCGGCGGTGGTGAAAGTACTTCCAAGCCTGTTGCTGAGCTCAGCACTGCTCAAAGACAGGACCTTCAGATGAAAAAAGCCAAGCTCATTGGCATGCTTGATGAGGTGGAGCAGAAGTACAGACAATATCATCAACAAATGCAAGGAGTGGTGAGTTGTTTTGAGCAGGCAGCAGGTTTGGGGTCAGCCAAATCTTACGCTTCACTCGCACTTGAAACAATTTCAAAGCAATTCCGGTGCTTAAAAGATGCAATTTGTGCACAAATAAAAGCGACAGGGAAAAGCTTAGGAGAAGAAGAAAATTGGTTGGGTTCAAAAATTGAAGGGTCTTCAAGATTGAGATACGTTGATCATCATTTAAGGCAGCAAAGAGCTTTGCAACAATTGGGAATGATTCAACACAATACTTGGAGACCACAAAGAGGTTTGCCTGAACGTGCTGTTTCTGTTCTTCGTGCTTGGCTCTTTGAGCATTTCCTTCATCCCTATCCCAAAGATTCAGACAAGATTATTCTCGCCAAACAAACCGGACTCACAAGGAGCCAAGTATCGAATTGGTTTATAAATGCAAGAGTTCGTCTATGGAAGCCAATGGTTGAAGAAATGTACTTGGAGGAAATCAAAGAGCAAGAGCAAAACGGGGATTCCCAAGACATGATTAGAGGAGGAGATCATCATCATCATCATCATCAAAGCAATAACAACAATAATAATAGTAATAATGATCCACAATATTCCAAGACAGAAAATTTGATGAACAACAACAACAACCCTTCCCATTCTTCAATCTCATCATCCTCAATGTTAGGAATAGGATCAACGACGGGCGGCTTCAACCTCGTACGACCGTCCTCCGACAATAACATTCTCTCAAGTCCCAAAAAACCAAGGACCACCACCAGTAACAGTACAGCCACAATCAACAACAACAACCTGCCCGAAACCCCATCCTCAAAATCCATGCTTTTAAGAGACAATATTGTTCATGATCATCATAGGGGTAGTTTTGGTAATTCCAATACATACCCGGTTGGTGAAATTGGCTCAACCTTCAATTCTGAGCTTTTAACACCAAGATTTCATGCAAATGGAGTCTCTCTCACTCTTGCCCTTCCCCATAATAGTAATTCAGATCATCTCTCTCTTTCAGCCAACCAACCAAATTACCACCACCTATCCTCCAACCCAAATCTTCACTTGGGCAGATCAAGGCTTGATATCACCAATAATCATCATCCCGGACCACCCAATTTCTCCGACGTCAATCCCGCTGCCCCCCCACCACCTCATTCCGCTTACGACCACGTTGAAATGCAAACCACCAAAAGGTTCGCCGCTCAATTGTTGCCGGATTTTGTTGCCTGA | 2088 | 46.31 | MATYFHGGSEIQANSDGIHTLYLMNPNYVPYSDTHSQTPPNMLFLNSSSTHALNPSTLPHAPPSNNHFVGIPLPTTDNPRPSYHEISTLHPMPPHRLHYNLWAPMDQQPDHGISGDSADLTFRRPTTQQGLSLSLSSQQSLYRTLSAEQEIQGGGGGAPSGEEIRVSGNSPTSVSVVSSGITGVQSVILGSKYLKAAQELLDEVVHVGKGNFKSDKGDGTKDKMKMKKESMATIGGDPSASVGGGESTSKPVAELSTAQRQDLQMKKAKLIGMLDEVEQKYRQYHQQMQGVVSCFEQAAGLGSAKSYASLALETISKQFRCLKDAICAQIKATGKSLGEEENWLGSKIEGSSRLRYVDHHLRQQRALQQLGMIQHNTWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKIILAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEIKEQEQNGDSQDMIRGGDHHHHHHQSNNNNNNSNNDPQYSKTENLMNNNNNPSHSSISSSSMLGIGSTTGGFNLVRPSSDNNILSSPKKPRTTTSNSTATINNNNLPETPSSKSMLLRDNIVHDHHRGSFGNSNTYPVGEIGSTFNSELLTPRFHANGVSLTLALPHNSNSDHLSLSANQPNYHHLSSNPNLHLGRSRLDITNNHHPGPPNFSDVNPAAPPPPHSAYDHVEMQTTKRFAAQLLPDFVA | 695 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 36850444 | 36853983 | + | ClCG02G022430.1 | Cla02g02176 | 268302 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g02176 | 695 | Gene3D | - | 381 | 459 | - | - | |
Cla02g02176 | 695 | MobiDBLite | consensus disorder prediction | 474 | 559 | - | - | |
Cla02g02176 | 695 | MobiDBLite | consensus disorder prediction | 647 | 668 | - | - | |
Cla02g02176 | 695 | ProSiteProfiles | 'Homeobox' domain profile. | 375 | 438 | IPR001356 | GO:0003677 | |
Cla02g02176 | 695 | MobiDBLite | consensus disorder prediction | 211 | 260 | - | - | |
Cla02g02176 | 695 | CDD | homeodomain | 378 | 439 | IPR001356 | GO:0003677 | |
Cla02g02176 | 695 | MobiDBLite | consensus disorder prediction | 211 | 230 | - | - | |
Cla02g02176 | 695 | PANTHER | BEL1-LIKE HOMEODOMAIN PROTEIN 5 | 6 | 642 | - | - | |
Cla02g02176 | 695 | MobiDBLite | consensus disorder prediction | 242 | 260 | - | - | |
Cla02g02176 | 695 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 6 | 642 | - | - | |
Cla02g02176 | 695 | MobiDBLite | consensus disorder prediction | 149 | 172 | - | - | |
Cla02g02176 | 695 | MobiDBLite | consensus disorder prediction | 450 | 472 | - | - | |
Cla02g02176 | 695 | Pfam | Homeobox KN domain | 395 | 434 | IPR008422 | GO:0003677|GO:0006355 | |
Cla02g02176 | 695 | MobiDBLite | consensus disorder prediction | 450 | 559 | - | - | |
Cla02g02176 | 695 | Pfam | Associated with HOX | 187 | 326 | IPR006563 | - | |
Cla02g02176 | 695 | Coils | Coil | 260 | 287 | - | - | |
Cla02g02176 | 695 | SUPERFAMILY | Homeodomain-like | 379 | 444 | IPR009057 | - | |
Cla02g02176 | 695 | SMART | prehox3 | 182 | 328 | IPR006563 | - | |
Cla02g02176 | 695 | SMART | HOX_1 | 378 | 442 | IPR001356 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g02176 | Cla-Chr2:36850444 | Cla09g00248 | Cla-Chr9:2482644 | 3.34E-74 | dispersed | |
Cla08g01664 | Cla-Chr8:29284914 | Cla02g02176 | Cla-Chr2:36850444 | 1.63E-42 | dispersed | |
Cla11g00386 | Cla-Chr11:4333548 | Cla02g02176 | Cla-Chr2:36850444 | 1.20E-101 | transposed | |
Cla10g01741 | Cla-Chr10:33296516 | Cla02g02176 | Cla-Chr2:36850444 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
60744 | PF07526 | POX | 2.80E-46 | No_clan | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g02176 | - | - | csv:101220747 | 1008.05 |