Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g02197 ATGGAACAAACAAAGTACAGAGCCGATCTTCTTTCATCCCTCTTCCTTGTCCTCATCCTTTTCCTCTCCCTTTCCGGCCGATCCGCCGTTCATGCCTACAAGAACTACACCGTCGGAGATTCCCTCGGTTGGTTCGACAAATTGGAGAAACCTGCCGTCGATTACCAAGAATGGACCGCTGGCAAGACCTTCGGCCTCGGCGATTTTCTAATTTTTAACACGGACAACAATCACTCGGTTGTGCAAACATACAATTTCACCACATACAAGCTTTGTGACTATGACGACGCATCGGAAAACGACACGATGGAATGGTCTGCTGCCGACCCGTCGGCGACCACTCCCTACGCCGTGACCGTGGCTGTCCCATTGGTGAAAGAAGGGACCAACTATTTCTTCTCTGGCAACTACGACGGAGAGCAATGCCAAAATGGCCAACAATTCAAAATAAACGTCACCCATGGACAAGGCCTCCCAAAAAGCATGAGAGATTCTTCCGACGAAGCTCCGGCTCCAGTAGTTCCCGACACCGGTGACCAAACCGAAGCTGCACCCGACACCATTGTCCCTTCCAGCTTCGACAATCCTCGAAACGACGTCGCTGATAGCGACAAGGAAGCTTCAGGCTCCGACTCGTTATCGCTTTGCATCAAGTTTAATGAGCTATTCTTCTTGTTAGCTGGTATTGTTTCTGCCTGCTTTTTTCTTTGTACTGAGTGA 720 49.86 MEQTKYRADLLSSLFLVLILFLSLSGRSAVHAYKNYTVGDSLGWFDKLEKPAVDYQEWTAGKTFGLGDFLIFNTDNNHSVVQTYNFTTYKLCDYDDASENDTMEWSAADPSATTPYAVTVAVPLVKEGTNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQTEAAPDTIVPSSFDNPRNDVADSDKEASGSDSLSLCIKFNELFFLLAGIVSACFFLCTE 239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37108841 37113183 + ClCG02G022660.1 Cla02g02197 268323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g02197 239 CDD Phytocyanin 34 152 - -
Cla02g02197 239 MobiDBLite consensus disorder prediction 156 210 - -
Cla02g02197 239 SUPERFAMILY Cupredoxins 34 152 IPR008972 -
Cla02g02197 239 PANTHER BNAA08G26900D PROTEIN 10 184 - -
Cla02g02197 239 Gene3D - 33 157 IPR008972 -
Cla02g02197 239 Pfam Plastocyanin-like domain 44 146 IPR003245 GO:0009055
Cla02g02197 239 ProSiteProfiles Phytocyanin domain profile. 34 154 IPR003245 GO:0009055
Cla02g02197 239 PANTHER BLUE COPPER PROTEIN 10 184 IPR039391 GO:0009055
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g02197 Cla-Chr2:37108841 Cla09g00260 Cla-Chr9:2556731 3.39E-09 dispersed
Cla02g02197 Cla-Chr2:37108841 Cla06g00026 Cla-Chr6:312917 2.29E-36 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g02197 - - cpep:111776932 432.18