Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g02265 | ATGGATTCGCCTCAGCCATCCCCACCAGAGCTTCATCTTCACGGTCTCACACCCCTCAAAGTTCTCGGAAAAGGAGCCATGGGAACCGTCTTCCTCGTCCACGACCGCCTTTCCGATGAGCCGGCTCATTTCCCCTTTGCTCTCAAAGTCGTCGAGAAATCCTCTTTCGTCTCCAAACTCGACGCCGACCGGCGAGCTCGTTGGGAGATTCAGGTTCTTTCTCGTTTGTCCTTCCCTAAACCCCACCCTTTCCTCCCCCGCATTATTGGTTCCTTCGAATCCCATGAGTTTTTGGGCTGGGCCGTTCCGTACTGTCCCGGCGGCGATCTTAACGTCTTGCGTTACCGTCAATTGGACCGTGTTTTCTCGCCGGCAGTCATTCGGTTCTATTTGGCCGAGATCGTCTGTGCGCTTGACCATCTTCATAGCATGGGCATCGTCTACCGAGATTTGAAGCCAGAGAATGTGTTAATTCAACAATCGGGTCACGTCACTCTCACGGACTTCGATTTGTCGCGTAGTTTGACACGCAGAACAGTAAAGGACGTCGTCTCGCTTGATAACTCCAACCACGAGAAGCCGCCGATCGCCGTCCGCCCAAAACACGGGCGAAACTTGACGCGATGGATTATGACGACCTCCAATGTTAAAGGCGGGTTAAAAAAGGCTAAATCGGCTCGGGTTAGTCCTGTGAGTCGCCGGAAGCCGAGTTTCACGAATGGCGAGCGGTCAAATTCGTTCGTCGGAACGGAGGAGTATGTCTCACCGGAGGTTGTTCGAGGCGACGGTCATGAATTCGCCGTCGACTGGTGGGCCCTGGGGATTCTCACGTACGAGATGCTCTACGGGACGACGCCGTTTAAGGGGAAAAACAGGAAAGAGACGTTCCGAAACGTTTTGGTTAAAGCTCCGGAGTTGATTGGAAAGCGTTCGGATTTAACGGATTTGATCGAACGGTTGCTGGTAAAAGACCCCACGAAGCGGTTGGGGTACGTAAGGGGCGCGTGCGAGATCAAAGAGCATGCGTTTTTTAACGGCGTTAAGTGGGACCTATTAACGGAGGTCACGAGACCGCCGTTTTTACCTCCTCGTGAAGAAACGGAATGGGCGGAGAATTTAACGCTCGGTTGTGTGAGTATAGCGGAATACTTTCTCAGACAGAGATCGCCACCTTCGTTTCCACCGTCGCCGTCGTCAACTCCGTCGACCTCCTTCAGTTGGCAGAATAACATGTCATTGACGGAGTTCTGA | 1251 | 53.0 | MDSPQPSPPELHLHGLTPLKVLGKGAMGTVFLVHDRLSDEPAHFPFALKVVEKSSFVSKLDADRRARWEIQVLSRLSFPKPHPFLPRIIGSFESHEFLGWAVPYCPGGDLNVLRYRQLDRVFSPAVIRFYLAEIVCALDHLHSMGIVYRDLKPENVLIQQSGHVTLTDFDLSRSLTRRTVKDVVSLDNSNHEKPPIAVRPKHGRNLTRWIMTTSNVKGGLKKAKSARVSPVSRRKPSFTNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFKGKNRKETFRNVLVKAPELIGKRSDLTDLIERLLVKDPTKRLGYVRGACEIKEHAFFNGVKWDLLTEVTRPPFLPPREETEWAENLTLGCVSIAEYFLRQRSPPSFPPSPSSTPSTSFSWQNNMSLTEF | 416 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 37770052 | 37771302 | + | ClCG02G023400.1 | Cla02g02265 | 268391 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g02265 | 416 | PANTHER | SERINE/THREONINE-PROTEIN KINASE UCNL | 11 | 387 | - | - | |
Cla02g02265 | 416 | SMART | serkin_6 | 16 | 344 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla02g02265 | 416 | ProSiteProfiles | Protein kinase domain profile. | 16 | 344 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla02g02265 | 416 | PANTHER | FLIPPASE KINASE 1-RELATED | 11 | 387 | - | - | |
Cla02g02265 | 416 | ProSitePatterns | Protein kinases ATP-binding region signature. | 22 | 49 | IPR017441 | GO:0005524 | |
Cla02g02265 | 416 | Gene3D | Transferase(Phosphotransferase) domain 1 | 241 | 363 | - | - | |
Cla02g02265 | 416 | MobiDBLite | consensus disorder prediction | 391 | 416 | - | - | |
Cla02g02265 | 416 | Gene3D | Phosphorylase Kinase; domain 1 | 18 | 108 | - | - | |
Cla02g02265 | 416 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 146 | 158 | IPR008271 | GO:0004672|GO:0006468 | |
Cla02g02265 | 416 | SUPERFAMILY | Protein kinase-like (PK-like) | 16 | 411 | IPR011009 | - | |
Cla02g02265 | 416 | MobiDBLite | consensus disorder prediction | 399 | 416 | - | - | |
Cla02g02265 | 416 | Gene3D | Transferase(Phosphotransferase) domain 1 | 109 | 177 | - | - | |
Cla02g02265 | 416 | Pfam | Protein kinase domain | 239 | 344 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla02g02265 | 416 | Pfam | Protein kinase domain | 19 | 182 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g02265 | Cla-Chr2:37770052 | Cla09g00796 | Cla-Chr9:8126349 | 4.97E-93 | dispersed | |
Cla02g02265 | Cla-Chr2:37770052 | Cla02g02140 | Cla-Chr2:36457569 | 6.22E-72 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80393 | PF00069 | Pkinase | 1.20E-30 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g02265 | - | K08286 | csv:101207338 | 734.947 |