Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g02265 ATGGATTCGCCTCAGCCATCCCCACCAGAGCTTCATCTTCACGGTCTCACACCCCTCAAAGTTCTCGGAAAAGGAGCCATGGGAACCGTCTTCCTCGTCCACGACCGCCTTTCCGATGAGCCGGCTCATTTCCCCTTTGCTCTCAAAGTCGTCGAGAAATCCTCTTTCGTCTCCAAACTCGACGCCGACCGGCGAGCTCGTTGGGAGATTCAGGTTCTTTCTCGTTTGTCCTTCCCTAAACCCCACCCTTTCCTCCCCCGCATTATTGGTTCCTTCGAATCCCATGAGTTTTTGGGCTGGGCCGTTCCGTACTGTCCCGGCGGCGATCTTAACGTCTTGCGTTACCGTCAATTGGACCGTGTTTTCTCGCCGGCAGTCATTCGGTTCTATTTGGCCGAGATCGTCTGTGCGCTTGACCATCTTCATAGCATGGGCATCGTCTACCGAGATTTGAAGCCAGAGAATGTGTTAATTCAACAATCGGGTCACGTCACTCTCACGGACTTCGATTTGTCGCGTAGTTTGACACGCAGAACAGTAAAGGACGTCGTCTCGCTTGATAACTCCAACCACGAGAAGCCGCCGATCGCCGTCCGCCCAAAACACGGGCGAAACTTGACGCGATGGATTATGACGACCTCCAATGTTAAAGGCGGGTTAAAAAAGGCTAAATCGGCTCGGGTTAGTCCTGTGAGTCGCCGGAAGCCGAGTTTCACGAATGGCGAGCGGTCAAATTCGTTCGTCGGAACGGAGGAGTATGTCTCACCGGAGGTTGTTCGAGGCGACGGTCATGAATTCGCCGTCGACTGGTGGGCCCTGGGGATTCTCACGTACGAGATGCTCTACGGGACGACGCCGTTTAAGGGGAAAAACAGGAAAGAGACGTTCCGAAACGTTTTGGTTAAAGCTCCGGAGTTGATTGGAAAGCGTTCGGATTTAACGGATTTGATCGAACGGTTGCTGGTAAAAGACCCCACGAAGCGGTTGGGGTACGTAAGGGGCGCGTGCGAGATCAAAGAGCATGCGTTTTTTAACGGCGTTAAGTGGGACCTATTAACGGAGGTCACGAGACCGCCGTTTTTACCTCCTCGTGAAGAAACGGAATGGGCGGAGAATTTAACGCTCGGTTGTGTGAGTATAGCGGAATACTTTCTCAGACAGAGATCGCCACCTTCGTTTCCACCGTCGCCGTCGTCAACTCCGTCGACCTCCTTCAGTTGGCAGAATAACATGTCATTGACGGAGTTCTGA 1251 53.0 MDSPQPSPPELHLHGLTPLKVLGKGAMGTVFLVHDRLSDEPAHFPFALKVVEKSSFVSKLDADRRARWEIQVLSRLSFPKPHPFLPRIIGSFESHEFLGWAVPYCPGGDLNVLRYRQLDRVFSPAVIRFYLAEIVCALDHLHSMGIVYRDLKPENVLIQQSGHVTLTDFDLSRSLTRRTVKDVVSLDNSNHEKPPIAVRPKHGRNLTRWIMTTSNVKGGLKKAKSARVSPVSRRKPSFTNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFKGKNRKETFRNVLVKAPELIGKRSDLTDLIERLLVKDPTKRLGYVRGACEIKEHAFFNGVKWDLLTEVTRPPFLPPREETEWAENLTLGCVSIAEYFLRQRSPPSFPPSPSSTPSTSFSWQNNMSLTEF 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37770052 37771302 + ClCG02G023400.1 Cla02g02265 268391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g02265 416 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 11 387 - -
Cla02g02265 416 SMART serkin_6 16 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g02265 416 ProSiteProfiles Protein kinase domain profile. 16 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g02265 416 PANTHER FLIPPASE KINASE 1-RELATED 11 387 - -
Cla02g02265 416 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Cla02g02265 416 Gene3D Transferase(Phosphotransferase) domain 1 241 363 - -
Cla02g02265 416 MobiDBLite consensus disorder prediction 391 416 - -
Cla02g02265 416 Gene3D Phosphorylase Kinase; domain 1 18 108 - -
Cla02g02265 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Cla02g02265 416 SUPERFAMILY Protein kinase-like (PK-like) 16 411 IPR011009 -
Cla02g02265 416 MobiDBLite consensus disorder prediction 399 416 - -
Cla02g02265 416 Gene3D Transferase(Phosphotransferase) domain 1 109 177 - -
Cla02g02265 416 Pfam Protein kinase domain 239 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g02265 416 Pfam Protein kinase domain 19 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g02265 Cla-Chr2:37770052 Cla09g00796 Cla-Chr9:8126349 4.97E-93 dispersed
Cla02g02265 Cla-Chr2:37770052 Cla02g02140 Cla-Chr2:36457569 6.22E-72 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80393 PF00069 Pkinase 1.20E-30 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g02265 - K08286 csv:101207338 734.947