Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g02299 ATGGGAGAAGACGATGAACAGGATAGACAGAAGATCACAAATCTTCATCTAAGATCGGAAATGATTACTATGGGCCATCCACAGATGGCAAACCAGCCTCATGTAATCAATCAGTCCCAAGTTATGAACCAGCCTCAGTCTCAAGTTATGAACCAGCCACAGGTGATTAATCAACCTCAATTTCTGAACCAAGGCCAGCTAATGAACCATTCTCAGATAATGTCTCAGTCACAGGCCATCAACCAGCCAAATCTTCTGCCGCAACCTCAGGCCATGCAGCAGTCCCAGATGATCATGAGTCACTCTCTGCCGCCTATGATGAGTGGCAACTATAAGGTATGGGCACATCCGCAAGCCCCTTTGGATCCTAACAAGAAGTACCGCAACTTCCCGAAGCCTAACTATGGAAATATGAAACAGTCAAGATCGGGGCGAGGAAATTGGAAGGGAAAAGGCGTTAGTGACAAAAGGATAAACAATAGGAGAATGGAAAAACCTTTACTGGGTTCCATAAGTGGTCCAAATAGTGCTGTAGGGTATCAACCTCCAAGTCTTCATGAGCTGCAGTCTCAAAATCGTTTAAGGGCTCGTAAGTTTTACTCTAAAAAGAAGTTTGGTAATAGATTTGCACCTTATGCACCTCGTAATACCACGTCTTTTATAATTCGTGCAAAGAAGTCTGGTGGGATCGCTTCGCTTGTGTCCCCTAGTCCCGTAACACCCGCTGTGCTTCCTACTCCAATGTTTTCCCCTTCAAGGGAGGCGTTGGGTGATATGGCCAAGGAGGAATGGGGTGTTGATGGTTATGGATCAATGAAAGGGTTGATAAGGCTTCGAGGGTCTGAGAATAAGGCAGAAGTGCAGGATGAGGAAGAAGAGGAAGTTGGTGGTGGTTCGAGTGATAGTGATGTAGAGGAACATCTGGAGGTAGAACGCAGATTGGACCATGATTTGAGCCGATTTGAAATGATATATCAGAACTATGGAGTAGAGTATAATAACTGTTTGGAAAATAGGGTCGATGATCAAGATAGCCATATAGCTCAGTTGGAGGAGGAGAACTTGACACTGAAGGAGAAACTTTTTCTTATGGAGAGAGAGCTTGTTGACTTGAGGAGGAAGTTGCAACTTCTCGAGGGGCAAAACCCAGCTATTGAAGATGTGAATGAGGAGGTAGTGGAGAACGTATCTGAGAATGAGAGTGATGGAGGGTTGGAGATGGAGTATGTATCTGAAATTAGACAAAACCAAGATGTTGGTGATGATTCTAAGGAGGAAGATGAAGAAGTCTTAGAGATTGAGGGTGGGGAAGAATGTGTAGGGGAAGATTTCAAGAGAGAGAAAGTGAATGAAAAGAAATACATAGTGAATGATGAAACCGTGAAGGAATCAGATGAACAGATTCCGGAAGACGGTGTGGCAAAAGATGATGAATCAAAGGGTGAACTTATTTCAGGGAAGGCAAATGAATGTGACAATATGGACGAAAACTTGGGTAATATTTTGCACACGGATTCAGGGATTGGAAAAGAAGCCATGGTCAATGATGAAGCCGAGCAGAATAGAGTTGTATCTGTAAAAATAGCTGTAGATGTAAAGGAAGGCGAGTCATACGGCTCTTCTAGTAAAGATTTTGGACGTGATCATTTGCTTGCATTGGCCTTCCTACGACGTCTAGATTCTGAGAAAGAATGGTTGACAGATATAAGATGCAGCAAGATTTTGCTTGCAGGATTCGTTTGCCATCTGGGAAATGAGCTGTTGCTTTCCACACGCTCGCAATTAACTGTGGATTTCTATAAGAGTTCATGTCCGAATGTTCTCAGAACCGTAAGGAGAGAAGTCATGAATGCTATTAAGAATGAGATGCGAATGGCTGCTTCGCTTCTTCGCCTCCACTTTCACGACTGCTTTGTTAATGGTTGTGACGGATCCGTGCTGTTGGATGGAAGTGATGGGGAGAAATTTGCACTTCCCAACATCAATTCTCTTAGAGGGCTTGAAGTTGTGGATAGAATCAAAGCCGCACTGGAGAGTTCATGCCCCGGAGTTGTATCATGTGCTGATTTATTAACTATAGCTGCAAGAGATTCTGTCCTCTTGAGTGGAGGACCGTCATGGAAGGTTTTATTGGGGAGAAGAGATGGATTGGTAGCGAATAAAACAGGAGCTGATCAAGGACTTCCCTCTCCATTTGAAAGCGTTAATGGTATAATCAACAAGTTTGTTGATGTTGGCCTTGATATCACCGACCTCGTCGCTTTATCTGGAGCCCATACAATTGGATTTGCAAGATGTGCAATGTTCAACAATAGGCTGTTCAACTTCTCAGGAAGTGGTTCTCCAGACCCAACCATGGAGTCCGCCATGGTATCTGATCTCCAAGCTTTATGCCCTCTCACCGACGACGGCAACAAGACCACCGTTCTCGACAGAAACTCCACCGATTTATTCGACAACCATTACTTCAAAAACTTGCTCAACCGGAAGGGCCTCTTGGGCTCCGACCAAATTCTGTTCTCCGACTCCGACGATGCTGCTCAGCCTCAAACCACCACTACAAAAGCCTTGGTCCAAGCTTATAGCTCTAACACCACGCTTTTCTTCGCCGACTTTGTCAAAGCCATGATCAAGATGGGGAATATAAGTCCACTCACCGGCTCCGCCGGTCAGATCCGAAACAACTGCAGACTCCTTAATTCCTCCTAA 2709 44.67 MGEDDEQDRQKITNLHLRSEMITMGHPQMANQPHVINQSQVMNQPQSQVMNQPQVINQPQFLNQGQLMNHSQIMSQSQAINQPNLLPQPQAMQQSQMIMSHSLPPMMSGNYKVWAHPQAPLDPNKKYRNFPKPNYGNMKQSRSGRGNWKGKGVSDKRINNRRMEKPLLGSISGPNSAVGYQPPSLHELQSQNRLRARKFYSKKKFGNRFAPYAPRNTTSFIIRAKKSGGIASLVSPSPVTPAVLPTPMFSPSREALGDMAKEEWGVDGYGSMKGLIRLRGSENKAEVQDEEEEEVGGGSSDSDVEEHLEVERRLDHDLSRFEMIYQNYGVEYNNCLENRVDDQDSHIAQLEEENLTLKEKLFLMERELVDLRRKLQLLEGQNPAIEDVNEEVVENVSENESDGGLEMEYVSEIRQNQDVGDDSKEEDEEVLEIEGGEECVGEDFKREKVNEKKYIVNDETVKESDEQIPEDGVAKDDESKGELISGKANECDNMDENLGNILHTDSGIGKEAMVNDEAEQNRVVSVKIAVDVKEGESYGSSSKDFGRDHLLALAFLRRLDSEKEWLTDIRCSKILLAGFVCHLGNELLLSTRSQLTVDFYKSSCPNVLRTVRREVMNAIKNEMRMAASLLRLHFHDCFVNGCDGSVLLDGSDGEKFALPNINSLRGLEVVDRIKAALESSCPGVVSCADLLTIAARDSVLLSGGPSWKVLLGRRDGLVANKTGADQGLPSPFESVNGIINKFVDVGLDITDLVALSGAHTIGFARCAMFNNRLFNFSGSGSPDPTMESAMVSDLQALCPLTDDGNKTTVLDRNSTDLFDNHYFKNLLNRKGLLGSDQILFSDSDDAAQPQTTTTKALVQAYSSNTTLFFADFVKAMIKMGNISPLTGSAGQIRNNCRLLNSS 902
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38088261 38099429 + ClCG02G023720.2 Cla02g02299 268425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g02299 902 MobiDBLite consensus disorder prediction 460 482 - -
Cla02g02299 902 Gene3D - 600 900 - -
Cla02g02299 902 MobiDBLite consensus disorder prediction 280 307 - -
Cla02g02299 902 SUPERFAMILY Heme-dependent peroxidases 594 900 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cla02g02299 902 MobiDBLite consensus disorder prediction 134 154 - -
Cla02g02299 902 ProSitePatterns Peroxidases active site signature. 626 637 IPR019794 GO:0004601
Cla02g02299 902 CDD secretory_peroxidase 594 897 IPR033905 GO:0004601|GO:0042744
Cla02g02299 902 PANTHER PEROXIDASE 72-RELATED 587 899 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02299 902 PRINTS Haem peroxidase superfamily signature 685 702 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02299 902 PRINTS Haem peroxidase superfamily signature 703 715 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02299 902 PRINTS Haem peroxidase superfamily signature 751 766 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02299 902 PRINTS Haem peroxidase superfamily signature 626 640 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02299 902 PRINTS Haem peroxidase superfamily signature 811 826 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02299 902 PRINTS Plant peroxidase signature 809 824 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02299 902 PRINTS Plant peroxidase signature 665 678 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02299 902 PRINTS Plant peroxidase signature 750 762 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02299 902 PRINTS Plant peroxidase signature 604 623 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02299 902 PRINTS Plant peroxidase signature 628 648 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02299 902 PRINTS Plant peroxidase signature 703 718 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02299 902 PRINTS Plant peroxidase signature 684 694 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02299 902 PRINTS Plant peroxidase signature 825 842 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02299 902 ProSiteProfiles Plant heme peroxidase family profile. 594 900 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02299 902 Gene3D Peroxidase, domain 2 729 882 - -
Cla02g02299 902 Coils Coil 333 381 - -
Cla02g02299 902 PANTHER PEROXIDASE 59 587 899 - -
Cla02g02299 902 Pfam Peroxidase 611 863 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02299 902 ProSitePatterns Peroxidases proximal heme-ligand signature. 751 761 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g02299 Cla-Chr2:38088261 Cla11g00557 Cla-Chr11:6305572 2.05E-97 dispersed
Cla09g00344 Cla-Chr9:3328006 Cla02g02299 Cla-Chr2:38088261 6.97E-90 dispersed
Cla09g01712 Cla-Chr9:34289676 Cla02g02299 Cla-Chr2:38088261 8.24E-49 dispersed
Cla02g02296 Cla-Chr2:38071087 Cla02g02299 Cla-Chr2:38088261 0 proximal
Cla02g02299 Cla-Chr2:38088261 Cla02g02300 Cla-Chr2:38103227 8.99E-99 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g02299 K00430 - bhj:120088324 958.362