Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g02300 ATGTGTATAAAAGGGAAGGTTGGATTTGTAGTTTCTCCCATCCAATCTGAATCCGTAATTATAATTAATACCACAAATAGCATGTCGTCCTTCAAATTTGAAGCTTTAGCAGCCTTGTTGTTGTGTATGATGTTGAGGGGATGTTGGGCCCAACTCAGCCCTACCTTCTACGACCAATCTTGCCCTAATCTAACCGCCATAGTCAGAGATGCAATAAGCCAGGCATTCCAGGGTGATGTTCGAGCCGGAGCCAAGCTCATTCGCTTTCACTTCCATGATTGCTTCGTCAATGGTTGTGATGGATCGGTTTTACTAGAGAATCAAGATGGTGTGGAAAGCGAGTTAGATGCTCCAGGGAACCAAGGAATACAAGGCTTTGACATTGTCGACAACATAAAAGCTGCAGTTGAAGCTGCCTGCCCAAACACCGTGTCTTGTGCTGACATCTTAGCCCTTTCCTCTCGTGAATCTGTCATCTTGACGGGAGGGCCAAGTTGGGTAGTTCAATTGGGAAGAAGAGATAGCAGAAACGCAAATAGAACTGGAGCTGAAAACAATCTCCCAAGCCCTTTCGAAACACTCGATCAACTTCGGGTAAAATTTAATGCAGTTGGTCTCGATTCTACCGATCTTGTGGCTTTATCTGGAGCGCATACGTTCGGAAGGTCAAGATGCGTATTCTTCAGCGGGCGGCTAAGCAATTTCAGCGGTACCGGAAGTCCAGACCCGACTCTTGACCCGACGTTACGGGATGCACTGGTCATCGCTTGTCCGACCGGCGACGGAAACAACCGCATCGCACTTGACGTGGCGACGCCGGACAGCTTCGACAATGCATACTACACCAATCTGGTCAACAACCGTGGGCTTCTCCAATCGGATCAAGAGCTGTTCTCAACCGAAGGGGCGGAAACCATCGCCACCGTGAACCGTTTTGCCGGCAACCAATCTGATTTCTTTGGTCAGTTCGGTCAGTCTATGATAAACATGGGGAACCTCCAACCATTACTTGGGCCCAATGGAGAAATCAGGTCCAATTGTAGGCGGGTTAATCCTTTGAATATTACCACTGGTGCTGCTACTGCTTTTATGTAA 1095 47.95 MCIKGKVGFVVSPIQSESVIIINTTNSMSSFKFEALAALLLCMMLRGCWAQLSPTFYDQSCPNLTAIVRDAISQAFQGDVRAGAKLIRFHFHDCFVNGCDGSVLLENQDGVESELDAPGNQGIQGFDIVDNIKAAVEAACPNTVSCADILALSSRESVILTGGPSWVVQLGRRDSRNANRTGAENNLPSPFETLDQLRVKFNAVGLDSTDLVALSGAHTFGRSRCVFFSGRLSNFSGTGSPDPTLDPTLRDALVIACPTGDGNNRIALDVATPDSFDNAYYTNLVNNRGLLQSDQELFSTEGAETIATVNRFAGNQSDFFGQFGQSMINMGNLQPLLGPNGEIRSNCRRVNPLNITTGAATAFM 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38103227 38104824 + ClCG02G023740.2 Cla02g02300 268426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g02300 364 Gene3D Peroxidase, domain 2 188 330 - -
Cla02g02300 364 PANTHER PEROXIDASE 58 40 351 - -
Cla02g02300 364 CDD secretory_peroxidase 51 350 IPR033905 GO:0004601|GO:0042744
Cla02g02300 364 Pfam Peroxidase 68 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02300 364 PRINTS Plant peroxidase signature 61 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02300 364 PRINTS Plant peroxidase signature 162 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02300 364 PRINTS Plant peroxidase signature 325 338 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02300 364 PRINTS Plant peroxidase signature 267 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02300 364 PRINTS Plant peroxidase signature 283 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02300 364 PRINTS Plant peroxidase signature 143 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02300 364 PRINTS Plant peroxidase signature 124 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02300 364 PRINTS Plant peroxidase signature 85 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02300 364 PRINTS Plant peroxidase signature 209 221 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02300 364 PRINTS Haem peroxidase superfamily signature 144 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02300 364 PRINTS Haem peroxidase superfamily signature 269 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02300 364 PRINTS Haem peroxidase superfamily signature 162 174 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02300 364 PRINTS Haem peroxidase superfamily signature 83 97 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02300 364 PRINTS Haem peroxidase superfamily signature 210 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02300 364 PANTHER PEROXIDASE 72-RELATED 40 351 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02300 364 ProSiteProfiles Plant heme peroxidase family profile. 51 351 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02300 364 ProSitePatterns Peroxidases proximal heme-ligand signature. 210 220 IPR019793 -
Cla02g02300 364 Gene3D - 56 351 - -
Cla02g02300 364 SUPERFAMILY Heme-dependent peroxidases 51 352 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00472 Cla-Chr1:5069003 Cla02g02300 Cla-Chr2:38103227 2.78E-144 dispersed
Cla02g02300 Cla-Chr2:38103227 Cla02g02302 Cla-Chr2:38129815 2.43E-108 dispersed
Cla02g02299 Cla-Chr2:38088261 Cla02g02300 Cla-Chr2:38103227 8.99E-99 tandem
Cla02g02300 Cla-Chr2:38103227 Cla02g02301 Cla-Chr2:38110302 1.68E-125 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g02300 K00430 - csv:101217743 586.645