Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g02301 ATGGAAATGGCTTCTTCTAAGTTTGGAGTAGTCTTGGCGTTGTTTTGGTTAGTGGGTTTGATGGTGGGAGGGTCCTTGGCTCAGCTAAACCCTTCATTTTACGCCAAAACATGTCCTAATTTACCCAAAATTGTAAATGGTGTGGTTGCACAGGCTCTGCGAACCGATGCTCGAGCTGGAGCCAAGCTGATTCGCCTCCATTTTCACGACTGCTTTGTTGATGGGTGCGATGCGTCTGTTTTGCTAGAGAACGCACCAGGCATAGACAGTGAACTTGATGCCCCTGGAAACCAAGGGATTCAAGGTCTTAACATTGTCGACGACATCAAATCTGCTGTCGAAAAGGCTTGCCCTCGCACTGTCTCTTGTGCCGACATCTTAGCCATAGCCTCCAAAGAATCTGTCGTACTGGCTGGAGGGCCTAGCTGGGTTGTGCCACTAGGGCGAAGAGACAGCAGAACAGCCAATAGAGAAGGAGCCTCAAACAACCTTGCCAGTCCCTTCGAAGATCTGGATACACTCAAAGCCAAGTTTGGTGTTTTTGGCCTCGATTCCACTGATCTTGTGGCTTTGTCTGGAGCACATACATTTGGGCGTTCAAGATGCGCATTTTTCAGCCAACGATTGGCCAACTTCAACGGCACGAACAGGCCAGATCCAACGCTAGACCCAGCCTACAGAGAGCAGCTCCGAAGAATTTGCTCTAGTGGCTCAGAGACACGAGCCAATTTCGACCCAACGACTCCGGACAAATTTGACAAAAACTATTATTCCAACCTTCAGGGGCTTCGGGGGCTGCTGCAGAGCGATCAAGAACTGTTCTCAACTCGCGGGGCTGACACGGTGGCCATTGTCAACCGTTTTGCCAAAAGCCAAGGCCAGTTCTTTAAAAGTTTTGGTGCGTCTATGATTAAAATGGGAAACATTACACCTTTAACTGGAACTAAAGGAGAGATTAGATTGAACTGTAGGAGGGTGAATCCAACTAGACCCAGGGGTGATGAGGGTCATGATGTTATATTTGTAAATTTTAAAAGATTTGAATGTTTAAGGACTAAATTCGTAATCGTGAGAACTTCAATTTTAGAAATTTTTATGAAGATTAGCAGCCATGAATTGGCGAGGTGGAGGAAGTCACTAGACAAAACGATGAATATTGATCGCAATATAACCCCAACACGAAACGAGAGCCTAGCATTATCAAAATGTTCATATTTAATTAGGTCAATGGGTTCCCCTAAATTAACAGCCTTAGTTGCAGTGTTAGCTTTGATGCTGGGATCCTCTCAGGCTCAGCTTAACCCTTTCTTCTACACCTTCACATGCCCTCAGCTGCCTTTTGTTGTTCTAAATGTGGTCTCACAAGCTCTCCAAACCGATGATCGAGCAGCTGCCAAGCTCATTCGTCTTCACTTTCACGACTGCTTCGTCAATGGGTGTGACGGGTCTGTGCTACTAGAAGACGTACCGGGAGTCATCGATAGTGAATTAAACGCACCTCCCAACAACGGAATCCAAGGGCTGGACATTGTGGACAACATCAAAGCAGCAGTTGAAAGCGCTTGCCCGGGCGTTGTCTCCTGTGCTGACATCTTAGCGCTCTCAGCTCAAGTTTCTGTCGTATTGGTAATTATCTCTGGAGGGCCGGCATGGGTTGTTCCACTGGGAAGAAAAGACAGCAGAAGAGCAAACAGAACTGCAGCTGCAAATCTTCCGAGTCCATTTGAAACTCTAGACGTGTTGAAAGCCAAATTTGCGGCACTTGGGCTGGGTTCTACAGATTTGGTGACTCTATCAGGAGCCCACACATTTGGTCGATCCAGATGCCTCTTTTTCACAGGACGGTTCGACAATTTCAATAACACTGGTCTGCCAGACCCTACTTTGGATGCTGCTTACAGGGAGCAGCTCCGTCAAGCTTGTACCACTCCTGGAACGCGAGTAAGCTTTGACCCGATCACACCAGACACCTTTGATAAAAACTACTACATCAATCTTCAAAATCACAAAGGACTTCTCCAAAGTGATCAAGAGCTTTTCTCAACTCCCGGGGCTGATACAACTGCCATTGTCAATACATTTGCCGCTAGCCAGCTTTTGTTCTTCATTCAATTTGGGAATTCCATGATTAAAATGGGAAATCTGAGCCCTCCACCTGGTATCCCATCTGAAGTCAGATTGAACTGTAGAAAGGTCAACCCACCCACTGTTCTACATGATATATGCTTTATTAGAAACAATGAATTAATGTTTGAAAGTTTTTCAATTAAGTGTGATGTAAAACAACAAAGTCAAAGATTGAATGCTTTATTGTTCTTTAGAATATATATTATTATATCACACAAGTATTCAATTGAGGTAGGCTCGTGTTTGCAAAGAATGACAAATTATAATGAGATAGTAGTCAAAAACAACTCTGTCCTTTTCTTGGGAATAAATTGCCCAAGCAACTCTTGTTATCCCCAAAACCATAATCAAATTGCATTCCCAAGCATGGCTTCCCTTAAATTCCTAGCCATTGTTGTGGTGGCTGCTTTGATGCTATCACCTTCTCACGCCCAGCTTTCCCCGTTCTTCTACGCCCAATCATGCCCTAAGCTGCCTTTCCTTGTTCTCAACGTGGTTGCCCGAGCTCTACAAACCGATGATCGAGCTGCTGCCAAACTCATTCGCCTCCATTTTCACGATTGCTTCGTTAATGGGTGTGATGGATCTGTGCTATTGGTGGACGTACCGGGCGTCATCGATAGTGAATTAAACGGACCTCCAAATCAAGGAATCCAAGGGATGGACATTGTGGACAACATCAAAGCAACAGTTGAAAGTGCTTGTCCAGGCGTTGTTTCCTGTGCTGACATCTTAGCCATTTCGGCTCAAATCTCGGTTTTCTTGTCGGGAGGACCAATGTGGGCAGTACCAATGGGAAGAAGAGACAGTAGGATAGCCAATAGAACCGGAACCTCAAACCTGCCGGGTCCCTCAGAAAGTCTAGACGGACTTAAAGCCAAGTTTGGGGTTCATGGGCTTGATTCTACCGATCTGGTGGCTCTATCAGGAGCCCACACGTTCGGCCGATCAAGATGCCTCTTCTTCAGTGACCGCTTCAACAACTTCAACAACACCGGCAGACCCGACCCCACACTTAACCCAGCATACAGGGAGCAGCTTCGAAGACAATGTACATCCCAACAAACACGAGTGAATTTCGATCCAATCACACCCACTAGATTCGACAAGGCCTATTACACCAATCTCGTCAGCTTGAGGGGGCTTCTCCAAAGTGACCAAGAGCTGTTCTCAACCCCCAGGGCTGATACCACAGCCATCGTCAGAACTTTCGCCGCCAACCAACCTGCCTTCTTTAACCAATTTGTGAAATCCATGATCAAAATGGGCAATCTCAAGCCTCCCCCTGGCATTGCTTCGGAAGTCAGATTGGATTGTAAGAGGGTCAATCGTGCCAGAGCCTACGACGTAATGTAA 3483 46.25 MEMASSKFGVVLALFWLVGLMVGGSLAQLNPSFYAKTCPNLPKIVNGVVAQALRTDARAGAKLIRLHFHDCFVDGCDASVLLENAPGIDSELDAPGNQGIQGLNIVDDIKSAVEKACPRTVSCADILAIASKESVVLAGGPSWVVPLGRRDSRTANREGASNNLASPFEDLDTLKAKFGVFGLDSTDLVALSGAHTFGRSRCAFFSQRLANFNGTNRPDPTLDPAYREQLRRICSSGSETRANFDPTTPDKFDKNYYSNLQGLRGLLQSDQELFSTRGADTVAIVNRFAKSQGQFFKSFGASMIKMGNITPLTGTKGEIRLNCRRVNPTRPRGDEGHDVIFVNFKRFECLRTKFVIVRTSILEIFMKISSHELARWRKSLDKTMNIDRNITPTRNESLALSKCSYLIRSMGSPKLTALVAVLALMLGSSQAQLNPFFYTFTCPQLPFVVLNVVSQALQTDDRAAAKLIRLHFHDCFVNGCDGSVLLEDVPGVIDSELNAPPNNGIQGLDIVDNIKAAVESACPGVVSCADILALSAQVSVVLVIISGGPAWVVPLGRKDSRRANRTAAANLPSPFETLDVLKAKFAALGLGSTDLVTLSGAHTFGRSRCLFFTGRFDNFNNTGLPDPTLDAAYREQLRQACTTPGTRVSFDPITPDTFDKNYYINLQNHKGLLQSDQELFSTPGADTTAIVNTFAASQLLFFIQFGNSMIKMGNLSPPPGIPSEVRLNCRKVNPPTVLHDICFIRNNELMFESFSIKCDVKQQSQRLNALLFFRIYIIISHKYSIEVGSCLQRMTNYNEIVVKNNSVLFLGINCPSNSCYPQNHNQIAFPSMASLKFLAIVVVAALMLSPSHAQLSPFFYAQSCPKLPFLVLNVVARALQTDDRAAAKLIRLHFHDCFVNGCDGSVLLVDVPGVIDSELNGPPNQGIQGMDIVDNIKATVESACPGVVSCADILAISAQISVFLSGGPMWAVPMGRRDSRIANRTGTSNLPGPSESLDGLKAKFGVHGLDSTDLVALSGAHTFGRSRCLFFSDRFNNFNNTGRPDPTLNPAYREQLRRQCTSQQTRVNFDPITPTRFDKAYYTNLVSLRGLLQSDQELFSTPRADTTAIVRTFAANQPAFFNQFVKSMIKMGNLKPPPGIASEVRLDCKRVNRARAYDVM 1160
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38110302 38123912 + ClCG02G023750.2 Cla02g02301 268427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g02301 1160 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Cla02g02301 1160 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02301 1160 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02301 1160 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02301 1160 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02301 1160 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02301 1160 Gene3D Peroxidase, domain 2 572 712 - -
Cla02g02301 1160 Gene3D Peroxidase, domain 2 165 306 - -
Cla02g02301 1160 Gene3D Peroxidase, domain 2 991 1131 - -
Cla02g02301 1160 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02301 1160 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02301 1160 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02301 1160 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02301 1160 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02301 1160 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02301 1160 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02301 1160 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02301 1160 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02301 1160 PANTHER PEROXIDASE 72-RELATED 844 1152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02301 1160 PANTHER PEROXIDASE 72-RELATED 20 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02301 1160 SUPERFAMILY Heme-dependent peroxidases 854 1152 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cla02g02301 1160 ProSitePatterns Peroxidases active site signature. 886 897 IPR019794 GO:0004601
Cla02g02301 1160 Gene3D - 33 327 - -
Cla02g02301 1160 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Cla02g02301 1160 ProSitePatterns Peroxidases active site signature. 464 475 IPR019794 GO:0004601
Cla02g02301 1160 Gene3D - 437 733 - -
Cla02g02301 1160 SUPERFAMILY Heme-dependent peroxidases 28 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cla02g02301 1160 CDD secretory_peroxidase 432 732 IPR033905 GO:0004601|GO:0042744
Cla02g02301 1160 PANTHER PEROXIDASE 58 20 327 - -
Cla02g02301 1160 CDD secretory_peroxidase 854 1151 IPR033905 GO:0004601|GO:0042744
Cla02g02301 1160 ProSitePatterns Peroxidases proximal heme-ligand signature. 1013 1023 IPR019793 -
Cla02g02301 1160 ProSiteProfiles Plant heme peroxidase family profile. 854 1152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02301 1160 Pfam Peroxidase 47 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02301 1160 Pfam Peroxidase 451 697 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02301 1160 Pfam Peroxidase 873 1116 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02301 1160 CDD secretory_peroxidase 28 326 IPR033905 GO:0004601|GO:0042744
Cla02g02301 1160 PANTHER PEROXIDASE 72-RELATED 424 733 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02301 1160 Gene3D - 859 1152 - -
Cla02g02301 1160 ProSiteProfiles Plant heme peroxidase family profile. 432 733 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02301 1160 PANTHER PEROXIDASE 58 844 1152 - -
Cla02g02301 1160 PANTHER PEROXIDASE 58 424 733 - -
Cla02g02301 1160 SUPERFAMILY Heme-dependent peroxidases 432 734 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cla02g02301 1160 ProSitePatterns Peroxidases proximal heme-ligand signature. 594 604 IPR019793 -
Cla02g02301 1160 ProSiteProfiles Plant heme peroxidase family profile. 28 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g02301 Cla-Chr2:38110302 Cla02g02303 Cla-Chr2:38156044 1.02E-127 dispersed
Cla02g02300 Cla-Chr2:38103227 Cla02g02301 Cla-Chr2:38110302 1.68E-125 tandem
Cla02g02301 Cla-Chr2:38110302 Cla02g02302 Cla-Chr2:38129815 3.03E-97 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g02301 K00430 - peu:105126277 671.389