Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g02302 ATGGGTTCTTTCAGTTTCTTGCTTTTGTTTGTGGGTGTTTTGTTTGGAAGGTCTTATGCCCAACTCTCCGAGAACTTCTACGACCAAACTTGCCCTCGTCTCCCTAACATTGTCCGCCGTGAGGTCAAGAGAGCTATCGAAACTGACATCCGTGCCGGTGCGAAACTCATTCGCTTCCATTTCCATGATTGCTTCGTCCAAGGTTGCGACGGCTCTGTTTTGCTAGAGGATGCTCCTGGCATAGACAGTGAGTTGAACGGACTTGGAAATTTAGGAATCCAAGGATTGGAGATTGTCGATGCTATCAAAGCCGCTGTCGAGAGGGAATGTCCCGGCATAGTCTCATGCGCCGACATCCTAGCTCAAGCCTCTAAAGACTCTGTGGACGTGCAAGGAGGGCCCAGTTGGAGAGTTTTATACGGAAGAAGAGATAGCAGAACAGCCAATAGATCAGGGGCTGATGAACTCCCAAGTCCCTTTGAAAATCTTGACCAACTCAAAAGAAAGTTTGAAGTCGTTGGGTTGAATTCCACTGATCTTGTTGCTTTATCAGGAGCACATACGTTTGGTCGGTCAAGATGCATGTTCTTCAGTGACCGTTTGTCCAACTTCAGTGGGAGTGGGCAACCAGATCCGACCCTAGATCCAACCTACAGGCAAGAACTGGAAAGAGCTTGTACAAGTCCAGAAACACGAGTGAATTTGGATCCAACAACACCGGACACATTTGACAAAAATTACTTCACCAATCTTCAAGCCAATCGAGGTCTTCTTAAGAGCGACCAAATTCTGTTCACTACTGGAGGGGCCGACACAATTGCCATTGTCAACCTTCTTGGATCGCGAGAAGGCACCTTCTTTAGACAATTTCGGCTCTCCATGATTAAGATGGGAAATATTAGACCCTTAACCGGAACCCAAGGGGAAATCAGAAGAAACTGCAGGAGGGTCAATGACTTGGGAGGTGAAGCAGGACATGATGTTATGTCTTATGCCCAACTCACCGAGAACTTCTACGACCAAACTTGCCCTCGCCTCCCTAACATTGTCCGCCGTGAGGTCAAGAGAGCTATCGAAACCGACATCCGTGCCGGGGCAAAACTCATTCGCTTCCATTTCCATGATTGCTTCGTTCAAGGTTGCGATGGCTCTGTTTTGCTAGAGGATGCTCCCGGCATAGACAGTGAGCTGAATGGACTTGGAAATTTAGGAATCCAAGGACTTGAGATTGTCGACGCCATCAAAGCCGCCGTCGAGAGGGAATGTCCTGGCATTGTCTCATGGGCTGATGAACTCCCAAGTCCCTTTGAAAATCTTGCCCAACTCAAGAAAAAGTTCAAAGACGTTGACTTGGATTCCATTGATCTTGTTGCTCTATCTGGGGCACATACGTTTGGTCGGTCGAAATGCATGTTCTTCAGCGACCGTTTGTCCAACTTTAGTGGGAGTGGGCATCCAGATCCGACCTTGGATCCAACCTATAGGCAAGAACTGAAAAAAGCTTGTACAAGTCCAGAAACACGAGTGAATTTGGATCCAACAACACCGGACACATTTGACAAAAATTACTTCACCAATCTTCAAGCCAATCGAGGTCTTCTACGGAGCGACCAAGTTCTATTCTCTACTGGAGGGGCCGACACAATTGCCATTGTCAACAATCTTGGGTCGCGAGAAGAAACTTTCTCTAGACAATTTCAGCTGTCCATGATTAAGATGGGAAATATTAAACCCTTAACTGGAACCCAAGGAGAAATTAGAAGAAACTGTAGGAGGGTCAATGACTTGGAAGATGAAGCAGGGCATGATGTTATGTAA 1818 46.86 MGSFSFLLLFVGVLFGRSYAQLSENFYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFVQGCDGSVLLEDAPGIDSELNGLGNLGIQGLEIVDAIKAAVERECPGIVSCADILAQASKDSVDVQGGPSWRVLYGRRDSRTANRSGADELPSPFENLDQLKRKFEVVGLNSTDLVALSGAHTFGRSRCMFFSDRLSNFSGSGQPDPTLDPTYRQELERACTSPETRVNLDPTTPDTFDKNYFTNLQANRGLLKSDQILFTTGGADTIAIVNLLGSREGTFFRQFRLSMIKMGNIRPLTGTQGEIRRNCRRVNDLGGEAGHDVMSYAQLTENFYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFVQGCDGSVLLEDAPGIDSELNGLGNLGIQGLEIVDAIKAAVERECPGIVSWADELPSPFENLAQLKKKFKDVDLDSIDLVALSGAHTFGRSKCMFFSDRLSNFSGSGHPDPTLDPTYRQELKKACTSPETRVNLDPTTPDTFDKNYFTNLQANRGLLRSDQVLFSTGGADTIAIVNNLGSREETFSRQFQLSMIKMGNIKPLTGTQGEIRRNCRRVNDLEDEAGHDVM 605
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38129815 38144227 + ClCG02G023755.1 Cla02g02302 268428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g02302 605 Gene3D Peroxidase, domain 2 433 573 - -
Cla02g02302 605 Gene3D - 26 318 - -
Cla02g02302 605 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02302 605 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02302 605 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02302 605 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02302 605 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02302 605 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02302 605 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02302 605 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02302 605 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02302 605 SUPERFAMILY Heme-dependent peroxidases 333 594 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cla02g02302 605 Gene3D - 332 432 - -
Cla02g02302 605 PANTHER PEROXIDASE 72-RELATED 330 431 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02302 605 PANTHER PEROXIDASE 72-RELATED 430 594 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02302 605 PANTHER PEROXIDASE 72-RELATED 9 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02302 605 ProSitePatterns Peroxidases proximal heme-ligand signature. 455 465 IPR019793 -
Cla02g02302 605 ProSiteProfiles Plant heme peroxidase family profile. 333 594 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02302 605 PANTHER PEROXIDASE 58 330 431 - -
Cla02g02302 605 PANTHER PEROXIDASE 58 430 594 - -
Cla02g02302 605 PANTHER PEROXIDASE 58 9 318 - -
Cla02g02302 605 CDD secretory_peroxidase 333 593 IPR033905 GO:0004601|GO:0042744
Cla02g02302 605 CDD secretory_peroxidase 21 317 IPR033905 GO:0004601|GO:0042744
Cla02g02302 605 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02302 605 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02302 605 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02302 605 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02302 605 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02302 605 Pfam Peroxidase 38 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02302 605 Pfam Peroxidase 350 430 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02302 605 Pfam Peroxidase 432 552 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02302 605 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Cla02g02302 605 ProSiteProfiles Plant heme peroxidase family profile. 21 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02302 605 Gene3D Peroxidase, domain 2 157 297 - -
Cla02g02302 605 SUPERFAMILY Heme-dependent peroxidases 21 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01871 Cla-Chr2:33876633 Cla02g02302 Cla-Chr2:38129815 4.21E-11 dispersed
Cla02g02300 Cla-Chr2:38103227 Cla02g02302 Cla-Chr2:38129815 2.43E-108 dispersed
Cla02g02302 Cla-Chr2:38129815 Cla09g00439 Cla-Chr9:4162682 5.80E-110 dispersed
Cla02g02301 Cla-Chr2:38110302 Cla02g02302 Cla-Chr2:38129815 3.03E-97 tandem
Cla02g02302 Cla-Chr2:38129815 Cla02g02303 Cla-Chr2:38156044 1.86E-132 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g02302 K00430 - peu:105126277 572.392