Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g02303 ATGCTCACTTCAAATTATAAAAACATGGCCTCCGCCAATGCCGCAGCCTCCTTTTTCTTTCTGGCTCTTCTCTTCGGAGGCTCTTTAGCTCAACTCTCCGAGACCTTTTACGATCAAACCTGCCCTCGCCTCCCCAACATTGTCCGTGCCTCCGTCAAAAGAGCTATCGAAACCGACATCCGTGCCGGTGCTAAACTCATCCGCCTCCATTTTCATGACTGCTTCGTCAATGGATGTGATGGCTCTGTTTTGCTAGAAGATGCTCCTGGCATAGTCAGTGAGCTCAACTCACCTGGAAATCAAGGAATCCAAGGCCTCGAGATTGTTGACGCCATTAAAGCCGACGTTGAGAGGGAATGCCCCGGCATCGTCTCCTGTGCCGACATTCTAGCTCAAGCTTCCAAGGACTCTGTCGATGTGCAAGGAGGGCCTAGTTGGAGAGTGTTATACGGAAGACGAGACAGTAGAATAGCGAACAAAACAGGGGCGGATAGTGGGTTGGCCAGTCCCTTCGAAACTCTAGACCAACTCAAAGCTAAATTTGCTGCTGTTGGCCTTGGTACCACTGATCTCGTCGCTTTATCAGGAGCGCATACGTTTGGTCGATCGAGATGCAGATTCTTCAGCCACCGATTTGCGAATTTCAACAACACTGGAAGGCCAGACCCATCACTGGATGCTAACTACAGAGGATTCCTTGAAGGGGTTTGCTCAGCAGGTCCAGACACAAGAGCCAACTTCGACCCAGTAACACCTGACGTGTTCGACAAAAACTACTACACAAATCTTCAAGTTGGGAAGGGGCTTCTGCAAAGTGACCAAGAGCTGTTCTCTACTCCAGGGGCTGACACCATCGCCATTGTCAACAGCTTCGCAGCCAGAGAAGGCACCTTCTTCAAGGAGTTCCGGCAGTCCATGATCAACATGGGGAACATCAAGCCTTTGACTGGTAGCCGTGGGGAAATTAGAAGAAACTGCAGGAGGGTTAACTCTGGGTTGGGTGGAGAAGGGCATGATGTTATGTAA 1026 50.29 MLTSNYKNMASANAAASFFFLALLFGGSLAQLSETFYDQTCPRLPNIVRASVKRAIETDIRAGAKLIRLHFHDCFVNGCDGSVLLEDAPGIVSELNSPGNQGIQGLEIVDAIKADVERECPGIVSCADILAQASKDSVDVQGGPSWRVLYGRRDSRIANKTGADSGLASPFETLDQLKAKFAAVGLGTTDLVALSGAHTFGRSRCRFFSHRFANFNNTGRPDPSLDANYRGFLEGVCSAGPDTRANFDPVTPDVFDKNYYTNLQVGKGLLQSDQELFSTPGADTIAIVNSFAAREGTFFKEFRQSMINMGNIKPLTGSRGEIRRNCRRVNSGLGGEGHDVM 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38156044 38157326 + ClCG02G023770.2 Cla02g02303 268429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g02303 341 Gene3D - 36 330 - -
Cla02g02303 341 PANTHER PEROXIDASE 58 20 330 - -
Cla02g02303 341 SUPERFAMILY Heme-dependent peroxidases 31 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cla02g02303 341 PANTHER PEROXIDASE 72-RELATED 20 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02303 341 Gene3D Peroxidase, domain 2 168 309 - -
Cla02g02303 341 ProSiteProfiles Plant heme peroxidase family profile. 31 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02303 341 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601
Cla02g02303 341 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02303 341 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02303 341 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02303 341 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02303 341 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02303 341 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Cla02g02303 341 Pfam Peroxidase 48 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02303 341 CDD secretory_peroxidase 31 329 IPR033905 GO:0004601|GO:0042744
Cla02g02303 341 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02303 341 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02303 341 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02303 341 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02303 341 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02303 341 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02303 341 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02303 341 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02303 341 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g02301 Cla-Chr2:38110302 Cla02g02303 Cla-Chr2:38156044 1.02E-127 dispersed
Cla02g02303 Cla-Chr2:38156044 Cla02g02305 Cla-Chr2:38174994 6.02E-132 dispersed
Cla02g02302 Cla-Chr2:38129815 Cla02g02303 Cla-Chr2:38156044 1.86E-132 tandem
Cla02g02303 Cla-Chr2:38156044 Cla02g02304 Cla-Chr2:38164826 1.23E-134 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g02303 K00430 - csv:101217543 592.038