Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g02304 ATGGCTTCCTTCTTCAAAGTTGTTTCTTTCCTTTTGTTTGTGGGGTTGATGGTTAAAGCTTCTAAAGCTCAGCTCTGTCCCACGTTTTACGACGACTCATGCCCCGACGTATCCAACATTGTGCGCAGTGTAGTGCAGCAAGCTTTGGAAACTGACGACCGTGCTGGTGCCAGACTCATTCGACTTCATTTCCACGACTGCTTTGTTGATGGGTGCGATGGGTCAGTTTTACTAGTGAACCAAACCGGCGTAGTGAGTGAGCTTGGCGCTCCTGGAAATGCCAATATTACAGGATTTAACATTGTTGATGACATTAAAGCCGCACTCGAGGAGGCTTGTCCTGGTGTTGTTTCTTGTGCCGACATTTTAGCCATAGCTTCTGTGGAAGCAGTTTCCTTGGCAGGAGGACCGTGTTGGGAGGTTCAACTGGGAAGAAGGGACAGCAGAACGGCTAACTTACAAGGCGCAATCAATGGGCTTCCAAGTCCCTTCGAAAATGTTACAGAACTTAAACGCAAGTTTGGTAGAGTGGGTCTTGATTCTACCGATCTTGTTGCCTTATCTGGTAAGTGGGCCCACACATTCGGGAGAGCAAGATGCCGATTTTTCGACGGACGTTTGAACGTTTCAAATCCAGACGCCACGCTGGACGCCACGTACGCACAGCAGCTCCGTGAGGCTTGCAGTGGGAGCAGAGACACGTTTGTAAACCTGGACCCCACCACTCCCGACGACTTCGACAACAACTACTACACAAACCTTCAGTCCAACTCCGGTCTTCTCACCAGCGACCAAGTCCTCTTCTCCACTCCCGGCGCCGACACCGTAGACACCGTCAACATCTTCGCCGGCAGCCAGCAGCAGTTCTTCGACAGCTTCGGCCAGTCCATGATCAACATGGGAAATATCAGCCCTTTAACCGGTGACCAGGGAGAAATTAGGTCCAATTGCCGAAGGCTCAACTGA 966 50.83 MASFFKVVSFLLFVGLMVKASKAQLCPTFYDDSCPDVSNIVRSVVQQALETDDRAGARLIRLHFHDCFVDGCDGSVLLVNQTGVVSELGAPGNANITGFNIVDDIKAALEEACPGVVSCADILAIASVEAVSLAGGPCWEVQLGRRDSRTANLQGAINGLPSPFENVTELKRKFGRVGLDSTDLVALSGKWAHTFGRARCRFFDGRLNVSNPDATLDATYAQQLREACSGSRDTFVNLDPTTPDDFDNNYYTNLQSNSGLLTSDQVLFSTPGADTVDTVNIFAGSQQQFFDSFGQSMINMGNISPLTGDQGEIRSNCRRLN 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38164826 38167429 + ClCG02G023780.2 Cla02g02304 268430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g02304 321 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02304 321 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02304 321 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02304 321 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02304 321 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02304 321 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02304 321 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02304 321 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02304 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02304 321 ProSiteProfiles Plant heme peroxidase family profile. 24 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02304 321 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Cla02g02304 321 CDD secretory_peroxidase 24 319 IPR033905 GO:0004601|GO:0042744
Cla02g02304 321 Gene3D - 29 321 - -
Cla02g02304 321 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02304 321 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02304 321 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02304 321 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02304 321 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02304 321 Pfam Peroxidase 41 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02304 321 Gene3D Peroxidase, domain 2 161 300 - -
Cla02g02304 321 SUPERFAMILY Heme-dependent peroxidases 24 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cla02g02304 321 PANTHER PEROXIDASE 72-RELATED 13 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02304 321 PANTHER PEROXIDASE 58 13 321 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g02304 Cla-Chr2:38164826 Cla07g00832 Cla-Chr7:23049341 2.61E-94 dispersed
Cla02g02303 Cla-Chr2:38156044 Cla02g02304 Cla-Chr2:38164826 1.23E-134 tandem
Cla02g02304 Cla-Chr2:38164826 Cla02g02305 Cla-Chr2:38174994 1.94E-165 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g02304 K00430 - csv:101212717 522.316