Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g02305 ATGGCTTCTTTTAACGCTATTATTCCTTTGATATTGTGTGTTTGTTTGATGGTTGGCTCTGTCAGTGCTCAACTTAGCTCTACGTTTTACGATACCACATGTCCCAATGTATCAAGTGTTGTGCATGGTGTTGTGGAGCAAGCTCTTCAAAATGATGATAGAGCCGGCGCCAAACTCATTCGTCTCCATTTCCACGATTGTTTTGTCGATGGTTGCGATGGGTCAGTATTGTTAGAGGACCAAGATGGTATAGTGAGCGAGTTGGGTGCACCTGGAAACGGAGGCATCACGGGATTCAATATTGTCAATGACATCAAAACTGCAGTAGAAAATGTTTGTCCAGGCATCGTCTCTTGTGCTGACATTCTAGCCCTTTCTTCTCGAGATGCCGTCACCTTGGCAGGAGGGCAAGGCTGGACGGTTCAATTGGGAAGAAGAGATAGTAGAACAGCTAATTTGCAAGGAGCCAGGGATAGGCTCCCAAGTCCTTTTGAGAATCTATCTCAACTTCAACAAAAGTTTAGGGATGTTCAACTTGACGATGATATCGATCTTGTTGCTCTATCAGGTGCACACACAATCGGGCGTTCGAGATGCAGATTTTTCGACGGACGGCTAAACACTTCGAACCCAGACCCGACGCTGGACTCGACGTACGCGGATCAGCTCCGGCAAAGTTGTCAGGCAGGGCGAGACACATTTGTGAATCTGGACCCGACGACGCCGAACACATTCGACAGGAACTACTTCACAAATCTTCAAAACAACCAAGGGCTTTTGGGAAGTGACCAAGTTCTATTCTCCACCGACGGAGCTTCAACTATCAGTACCGTCAACAACTTCGCCGGCAGCCAGAGCGCATTCTTCACCGCCTTTGCTCAGTCAATGATTAATATGGGAAATCTCAGCCCTTTGACTGGGACTAGTGGAGAAATCAGGACCAATTGCAGAAGGCTGAATTAA 963 47.14 MASFNAIIPLILCVCLMVGSVSAQLSSTFYDTTCPNVSSVVHGVVEQALQNDDRAGAKLIRLHFHDCFVDGCDGSVLLEDQDGIVSELGAPGNGGITGFNIVNDIKTAVENVCPGIVSCADILALSSRDAVTLAGGQGWTVQLGRRDSRTANLQGARDRLPSPFENLSQLQQKFRDVQLDDDIDLVALSGAHTIGRSRCRFFDGRLNTSNPDPTLDSTYADQLRQSCQAGRDTFVNLDPTTPNTFDRNYFTNLQNNQGLLGSDQVLFSTDGASTISTVNNFAGSQSAFFTAFAQSMINMGNLSPLTGTSGEIRTNCRRLN 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38174994 38176505 + ClCG02G023790.1 Cla02g02305 268431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g02305 320 CDD secretory_peroxidase 24 318 IPR033905 GO:0004601|GO:0042744
Cla02g02305 320 PANTHER PEROXIDASE 58 15 320 - -
Cla02g02305 320 SUPERFAMILY Heme-dependent peroxidases 24 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cla02g02305 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Cla02g02305 320 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02305 320 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02305 320 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02305 320 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02305 320 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02305 320 PANTHER PEROXIDASE 72-RELATED 15 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02305 320 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02305 320 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02305 320 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02305 320 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02305 320 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02305 320 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02305 320 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02305 320 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02305 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g02305 320 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Cla02g02305 320 Pfam Peroxidase 43 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02305 320 Gene3D - 29 320 - -
Cla02g02305 320 ProSiteProfiles Plant heme peroxidase family profile. 24 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g02305 320 Gene3D Peroxidase, domain 2 161 299 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g02303 Cla-Chr2:38156044 Cla02g02305 Cla-Chr2:38174994 6.02E-132 dispersed
Cla02g02305 Cla-Chr2:38174994 Cla11g00557 Cla-Chr11:6305572 2.72E-97 dispersed
Cla02g02304 Cla-Chr2:38164826 Cla02g02305 Cla-Chr2:38174994 1.94E-165 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g02305 K00430 - csv:101212957 515.768