Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g02366 ATGAAGCAATGGAGAGGCTTAAATTCAGAATCTCTTGCAACCTTATGGGTATTGTGCACAGCTCTAGCTCTAGCTCCAGCTCCATTTGTTGGATCGGTCTCATCTCCAAAGCACCAATTTCGTGGAATTTCTCCCCAAGATGAGATGTATTACAAGTCGTCGGACATGATCAAATGTAGAGACGGTTCCAACAAATTTTCCAAGGCTCAGCTTAACGATAACTACTGCGATTGCCCTGATGGCACTGACGAACCTGGCACATCTGCATGCCCGAATGGGAAGTTCTATTGTCGAAATGCAGGGCACGTTCCACTTTTATTGTTTTCTTCAAGGGTGAACGACGATATATGTGATTGTTGTGATGGAAGTGACGAATATGACAGCAAAGTCAAATGCCCAAATACGTGCTGGGAAACTGGGAAAGTGGCAAGAGATAAATTGAAGAAAAAGATTTCAACCTTTGAAGAAGGTGTTAAAATTAGAAAACAAGAAGTCGAACAGGCAAAAATTGCAATAATCAAGGATGAGGCAGAGCTATTGAAGTTGAAAGATGAGGAAAAAGTATTAAAAGGACTCGTTGAACAACTCAAAGAGCGCAAAGAACAAATAGAGAAGGTAGAAGAGGAGGAGCGATTATGGAAAGAAAAAGAGGAAAAGAAACGTTTGGAGAGAGAAAAAGATGGGACTAAAAAAACTGAGTCAGAAACAACTAGTGTTGGGGAAAGCAAAACTCATGAAGAAGACAATTGGAAAAAAAATGAAGCTATAGAAAATTATGACAAGGAATATAAACAAGGAGAAGGCAACGATGATGATAAAATTGGGAACTGGGAGGACTCTGCCACAGATCAGGCTAGGATGGAAGAAGAAGTTGATTCAGAACTCGAAGCTCAACTTTCTAATAAACCTGAAACAGAAGCATCATTGCTGAAAGAGGATACAGCAGGAGAGAACGACGAACCCTTGGCTAAATCTGAAACTGGAGAAAATGCTGGCACTAAAGAATCATCTGAAGAAGTCCTGAGAAAGAATGATGCTAGTTCAGAGTTGTCAAGGGAAGAGTTGGGCCGTCTTGTTGCTTCTCGTTGGACAGGAGAAAATACTGAAGAACAGTCAGGGAACATGGATAGTACAAACGATAGTGATGAAGAAAGTCATGATATCTCAAAAGACACACATGAAAATGACGGTTATGCTTCAGAGACTGATGATGATAACCAAAGATACGATGATGACCTAGAGGGTGATTTAGAAGATATCAGAGATGAATTTCGTGATGATTCTACTTCGTCTGAAAGATATTATTCAGATACAGAATTGGACTCACCAGATGTGGATACCCAAAGTAACCCGTCCTGGCTTGAGAAGATACAAAAAACTGTTCGAAATGTCCTCAAAGCTGTCAATATATTCCAGTCTCCAGTGAACCAATCAGATGCTGCTAACGTGCGCAAGGAATATGATGAGTCCAGTGCCAAGTTATCAAAAATACAGTCAAGGATCTCAAGTTTATCACAGAAGCTAAAGAATGATTTTGGTCCAGAGAAGGAGTTCTATTCATTCTATGACCAATGTTTTGAAAGCAAGGAGAACAAATACGTTTACAAAATCTGTCCTTATAAACAAGCTTCGCAGGTTGAAGGGCACTCAACTACTCGTTTGGGGCGCTGGGATAAATTTGAGGACTCATATAGGGTTATGATCTTTTCAAGTGGGGATACGTGCTGGAATGGACCTGATAGAAGCTTAAAGGTCAAGCTAAGATGTGGGCTTAAAAATGACATAACCGATGTAGATGAACCAAGCCGTTGCGAGTACGTGGCATTGTTATCAACCCCAGCTGCTTGTGTAGAGGAAAAGCTTCAGGAACTGAAACACAAGTTGGACATGCTGAGTAAAGAAGAGGCAGAGAAGCATGATGAACTTTGA 1929 40.69 MKQWRGLNSESLATLWVLCTALALAPAPFVGSVSSPKHQFRGISPQDEMYYKSSDMIKCRDGSNKFSKAQLNDNYCDCPDGTDEPGTSACPNGKFYCRNAGHVPLLLFSSRVNDDICDCCDGSDEYDSKVKCPNTCWETGKVARDKLKKKISTFEEGVKIRKQEVEQAKIAIIKDEAELLKLKDEEKVLKGLVEQLKERKEQIEKVEEEERLWKEKEEKKRLEREKDGTKKTESETTSVGESKTHEEDNWKKNEAIENYDKEYKQGEGNDDDKIGNWEDSATDQARMEEEVDSELEAQLSNKPETEASLLKEDTAGENDEPLAKSETGENAGTKESSEEVLRKNDASSELSREELGRLVASRWTGENTEEQSGNMDSTNDSDEESHDISKDTHENDGYASETDDDNQRYDDDLEGDLEDIRDEFRDDSTSSERYYSDTELDSPDVDTQSNPSWLEKIQKTVRNVLKAVNIFQSPVNQSDAANVRKEYDESSAKLSKIQSRISSLSQKLKNDFGPEKEFYSFYDQCFESKENKYVYKICPYKQASQVEGHSTTRLGRWDKFEDSYRVMIFSSGDTCWNGPDRSLKVKLRCGLKNDITDVDEPSRCEYVALLSTPAACVEEKLQELKHKLDMLSKEEAEKHDEL 642
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38697072 38724616 + ClCG02G024440.2 Cla02g02366 268492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g02366 642 SUPERFAMILY Mannose 6-phosphate receptor domain 523 616 IPR009011 -
Cla02g02366 642 ProSiteProfiles MRH domain profile. 523 618 IPR044865 -
Cla02g02366 642 Coils Coil 480 500 - -
Cla02g02366 642 MobiDBLite consensus disorder prediction 218 451 - -
Cla02g02366 642 Pfam Glucosidase II beta subunit-like 34 170 IPR028146 -
Cla02g02366 642 PANTHER BNACNNG14010D PROTEIN 30 642 - -
Cla02g02366 642 MobiDBLite consensus disorder prediction 405 421 - -
Cla02g02366 642 Gene3D - 518 617 IPR009011 -
Cla02g02366 642 MobiDBLite consensus disorder prediction 306 324 - -
Cla02g02366 642 Pfam Glucosidase II beta subunit-like protein 484 642 IPR036607 -
Cla02g02366 642 MobiDBLite consensus disorder prediction 379 404 - -
Cla02g02366 642 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 30 642 IPR039794 -
Cla02g02366 642 Coils Coil 165 232 - -
Cla02g02366 642 MobiDBLite consensus disorder prediction 331 356 - -
Cla02g02366 642 MobiDBLite consensus disorder prediction 422 440 - -
Cla02g02366 642 Coils Coil 614 641 - -
Cla02g02366 642 MobiDBLite consensus disorder prediction 218 299 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00219 Cla-Chr2:2278129 Cla02g02366 Cla-Chr2:38697072 4.02E-24 dispersed
Cla02g00220 Cla-Chr2:2279816 Cla02g02366 Cla-Chr2:38697072 5.06E-40 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g02366 K08288 - csv:101221877 1090.1