Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla03g00006 | GAGAGCACTGGAGCAAGCAACAGGGTATACATCATCTGCTTGAATTTTTGTACGTCCAAGAGCTACACCATGGATCTTGTCCTGTTGGAGAAGGCTCTAGTGGGGATCTTCGTGGCCATGGTTGTTGCCATTAGCATATCCAAATTGAGGGGCAAGCGTTTTAAACTCCCACCAGGTCCCATTCCCATCCCCATATTTGGGAATTGGCTGCAGGTTGGGGATGACTTGAACCACCGCAACTTGACGGAGCTGGCCAAAAAGTTCGGTGACATATTGCTGTTGAGAATGGGGCAACGAAACTTGGTGGTGATTTCTTCACCAGAGTTGGCCAAGGAAGTGCTACACACCCAAGGAGTAGAATTTGGGTCTAGGACAAGAAACGTGGTGTTCGATATCTTCACAGATAAGGGTCAAGATATGGTGTTCACGGTGTACGGCAAGCACTGGATGAAAATGAGGCGAATCATGACCATTCCTTTTTTCACCAATAAGGTGGTTCAGCAGAACAGGTTTAGTTGGGAGGACGAGGCTGCCAGAGTTGTGGAGGATCTAAAGAATAACCCAGAAGCCTCAACCACCGGCGTGGTTCTGAGGAAGCGGCTACAGCTTCTAATGTATAACAATATGTACAGAATGATGTTTGACAAGAGATTCGACAGCATGGAAGACCCTCTGTTCAATAACCTTAAGCATATAAACGCAGAGAGGAGTCGACTATCTCAGAGCTTTGAATACAACTATGGTGATTTCATCCCCATACTCAGGCCTTTCCTTAGAGGCTATTTGAATGTGTGTAAGGATGTCAAAGAGAGGAGGCTCAAGCTCTTCAAAGACCATTTTGTCGATGAGAGGAGGAGACTAACTAGCACCATGAGCAACAAGGAGGATGGTGTAAAATGTGGCATTGATCATATTGTGGAGGCTCAAGAGAATGGTGAGATCACCGAAGACAATGTTCTCTTCATTGTTGAGAATATCAACGTTGCTGCTATTGAGACAACATTGTGGTCAATGGAGTGGGCTATTGCGGAGCTAGTTAACCACCCCAACATCCAGAAAAAGCTGAGGGACGAGCTCGATTTGGTGCTCGGATATGGCGTCCAAATTATGGAGCCCGACATTCGCAATCTACCTTACTTGCAGGCTGTCATCAAGGAGACTTTGCGGTTGAGAATGGCCATTCCTTTGTTAGTGCCTCACATGAATCTCCAAGACGCCAAGTTGGCTTCTTATGACATCCCGGCAGAAAGCAAGATTCTAGTGAATGCATGGTGGCTGGCCAACAACCCTGATCACTGGAACAAACCTCAAGAATTCCGACCTGAGAGGTTTTTGGAGGAGGAGCAACATGTAGATCCTATAGGGAATGACTTTAGATACCTTCCTTTCGGTGCCGGAAGGAGGAGCTGCCCTGGCATTGTTCTTGCCTTGCCCATCGTTGCTATTACTTTGGGTCGTCTCATTCAAAATTTTGAGCTGCTGCCTCCTCTTGGACACTCCAAGATTGATACCACCGAAAAGCCTGGACAGTTCAGCTTGCAAATATTCAACCACTCTACTATTGTGGCAAAGTCAAGGTCTTTATGA | 1587 | 46.57 | ESTGASNRVYIICLNFCTSKSYTMDLVLLEKALVGIFVAMVVAISISKLRGKRFKLPPGPIPIPIFGNWLQVGDDLNHRNLTELAKKFGDILLLRMGQRNLVVISSPELAKEVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGKHWMKMRRIMTIPFFTNKVVQQNRFSWEDEAARVVEDLKNNPEASTTGVVLRKRLQLLMYNNMYRMMFDKRFDSMEDPLFNNLKHINAERSRLSQSFEYNYGDFIPILRPFLRGYLNVCKDVKERRLKLFKDHFVDERRRLTSTMSNKEDGVKCGIDHIVEAQENGEITEDNVLFIVENINVAAIETTLWSMEWAIAELVNHPNIQKKLRDELDLVLGYGVQIMEPDIRNLPYLQAVIKETLRLRMAIPLLVPHMNLQDAKLASYDIPAESKILVNAWWLANNPDHWNKPQEFRPERFLEEEQHVDPIGNDFRYLPFGAGRRSCPGIVLALPIVAITLGRLIQNFELLPPLGHSKIDTTEKPGQFSLQIFNHSTIVAKSRSL | 528 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 111206 | 113212 | + | ClCG03G000060.1 | Cla03g00006 | 268506 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla03g00006 | 528 | PRINTS | P450 superfamily signature | 382 | 393 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla03g00006 | 528 | PRINTS | P450 superfamily signature | 329 | 346 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla03g00006 | 528 | PRINTS | P450 superfamily signature | 461 | 470 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla03g00006 | 528 | SUPERFAMILY | Cytochrome P450 | 57 | 512 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla03g00006 | 528 | PANTHER | TRANS-CINNAMATE 4-MONOOXYGENASE | 24 | 527 | - | - | |
Cla03g00006 | 528 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 463 | 472 | IPR017972 | GO:0005506|GO:0016705 | |
Cla03g00006 | 528 | Gene3D | Cytochrome P450 | 46 | 521 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla03g00006 | 528 | PANTHER | TRANS-CINNAMATE 4-MONOOXYGENASE | 24 | 527 | - | - | |
Cla03g00006 | 528 | PRINTS | E-class P450 group I signature | 318 | 335 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla03g00006 | 528 | PRINTS | E-class P450 group I signature | 460 | 470 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla03g00006 | 528 | PRINTS | E-class P450 group I signature | 204 | 222 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla03g00006 | 528 | PRINTS | E-class P450 group I signature | 85 | 104 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla03g00006 | 528 | PRINTS | E-class P450 group I signature | 381 | 399 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla03g00006 | 528 | PRINTS | E-class P450 group I signature | 470 | 493 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla03g00006 | 528 | PRINTS | E-class P450 group I signature | 422 | 446 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla03g00006 | 528 | PRINTS | E-class P450 group I signature | 109 | 130 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla03g00006 | 528 | PRINTS | E-class P450 group I signature | 338 | 364 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla03g00006 | 528 | Pfam | Cytochrome P450 | 57 | 514 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla02g01859 | Cla03g00006 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g01859 | Cla-Chr2:33759526 | Cla03g00006 | Cla-Chr3:111206 | 0 | dispersed | |
Cla03g00006 | Cla-Chr3:111206 | Cla11g01116 | Cla-Chr11:22630782 | 0 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla03g00006 | K00487 | - | csv:101208511 | 915.22 |