Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla03g00031 | AAAACCCTCTTTCCCTCGCTGGCCTTCTTCCCTCCCACTCTCAGCAGGCCCTCACCTTTCTCCAGTTTTCTCTCTCTCGCTCAGATTCCCCGTTTTTCTTGCTTTATCATTCTCTCTGTCCTTCAACCTTTTCTTCTTCCTTCCACTTCAATGGCTTCCACTTCTGGAGATAGATCTTCTCTCGATCCACCCACCTCCAACGACTCCGAGAAGCCTCCAATTGAGCCTATAAGGATGCCTACAGTTGAAGAGATTCGCGGCCAAGATATTTGGAACAACTGTGCAGTTCGCAGTGTTGTTAGTGGAGTCATGGGTGGTGGGCTTGGATTGTTCATGGGATTATTTTTGGGGGCATTGGATAATCCATTGATGCAAGACGAGATGACTGCTAAACAACAATTTGTTTACACTGCAAAACAGATGGGACGGCGTAGTTGGGGTTCTGCAAAGGCGTTTGCAGTCATGGGCTTTATTTTCTCAGCTGCAGAATGTGTTGTAGAAAAGGCTCGAGCCAAACATGATATGACGAATACAGTAGTTGCTGGTTGTGTAACCGGTGGTTCAATATCAGCTAAAGGTGGCCCAAAGGCAGCTTGCGCTGGTTGTGCAGGTTTTGCTGCATTCTCAATATTCCTTCTTCTTCTTCCACAACCAATCCAATATCCAATATCTCACCAAACCAAACTGTCAACTCAACAACTCAAGAAGAGTGAAGAAGTGAAAGCTAAGTCCATCTCGCCATTGCACACCCAAATCTCTTCTTCACCACACACATGTCGACCACCCACGACCCCCAACTGGTCTGCGTCACCGGCGCCAGTGGCTGTATCGGATCCTGGCTCGTTCACCTCCTCCTCCTCCGCGGCTACTCCGTTCACGCCACCCTCCAAAATCTCAGACGAGAGCGAAACCAAGCATCTGGAAGATTTAGAGGGAGCAGAGGCTCGTCTTCGTCTCTTCCAAATCGACCTCCTCGATTATGACTCCATTGTCCCCGCCGTCACTGGTTGTGCTGGCGTCTTCCACGTCGCGTCTCCTTGCATCGTTGATCCTGTACAAGATCCTGAGAGGGATTTATTGGATCCGGCTATCAAAGGAACCATCAATGTCCTGACGGCGGCCAAGGAGGCTGGGGTACAACGCGTAGTGGTGACTTCTTCTATCTCAGCCATGATTCCGAACCCTAACTGGCCGGCGAATGTTGTAAGGAATGAAGAATGTTGGACCGATATTGATTACTGCAAGAAAAAGGGGCTGTGGTATTCAATTTCAAAAACTCTAGCAGAAAAGGCTGCTTGGGATTTTGCTAAGGAGAAAGGATTGGATGTGGTGGTGATTAATCCAGGCACAGTGATGGGCCCTGTGTTTCCTCCCAGAATTAATGCCAGCATGCAAATGCTTTTAAAACTTCTTCAGGGGTGCAGTGAGACATTCGAGGACGTTTTTATCGGAGTAGTGCACTTTAAAGATGTTGCATTAGCACACATTTTGGTCTATGAAAACAAATCAGCTACAGGAAGGCACTTTTGTGCTGAGGCCATAGCTCGTTACTCTGACTATGTAGCGAAGGCTGCTGAACTCTTCCCTCAGTATAATGTGCCCAGATCGGTAGAAGATACACAGCCTGATTTGGTGAGAGCAAAAGATGGAGCCAAGAAGTTGATGAACCTGGGGCTGGAATTCATCCCAATGGAACAAATTCTCAAGGAAGCCGTTGAGGATCTAAAAAAGAAGGGATATATTTCCTGA | 1749 | 47.68 | KTLFPSLAFFPPTLSRPSPFSSFLSLAQIPRFSCFIILSVLQPFLLPSTSMASTSGDRSSLDPPTSNDSEKPPIEPIRMPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGLFMGLFLGALDNPLMQDEMTAKQQFVYTAKQMGRRSWGSAKAFAVMGFIFSAAECVVEKARAKHDMTNTVVAGCVTGGSISAKGGPKAACAGCAGFAAFSIFLLLLPQPIQYPISHQTKLSTQQLKKSEEVKAKSISPLHTQISSSPHTCRPPTTPNWSASPAPVAVSDPGSFTSSSSAATPFTPPSKISDESETKHLEDLEGAEARLRLFQIDLLDYDSIVPAVTGCAGVFHVASPCIVDPVQDPERDLLDPAIKGTINVLTAAKEAGVQRVVVTSSISAMIPNPNWPANVVRNEECWTDIDYCKKKGLWYSISKTLAEKAAWDFAKEKGLDVVVINPGTVMGPVFPPRINASMQMLLKLLQGCSETFEDVFIGVVHFKDVALAHILVYENKSATGRHFCAEAIARYSDYVAKAAELFPQYNVPRSVEDTQPDLVRAKDGAKKLMNLGLEFIPMEQILKEAVEDLKKKGYIS | 582 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 320249 | 331135 | + | ClCG03G000300.1 | Cla03g00031 | 268531 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla03g00031 | 582 | MobiDBLite | consensus disorder prediction | 245 | 298 | - | - | |
Cla03g00031 | 582 | Pfam | NAD dependent epimerase/dehydratase family | 307 | 509 | IPR001509 | - | |
Cla03g00031 | 582 | MobiDBLite | consensus disorder prediction | 53 | 76 | - | - | |
Cla03g00031 | 582 | PANTHER | CINNAMOYL-COA REDUCTASE-LIKE PROTEIN | 299 | 573 | - | - | |
Cla03g00031 | 582 | CDD | FR_SDR_e | 300 | 559 | - | - | |
Cla03g00031 | 582 | Pfam | Tim17/Tim22/Tim23/Pmp24 family | 94 | 209 | - | - | |
Cla03g00031 | 582 | MobiDBLite | consensus disorder prediction | 53 | 67 | - | - | |
Cla03g00031 | 582 | Gene3D | - | 292 | 582 | - | - | |
Cla03g00031 | 582 | MobiDBLite | consensus disorder prediction | 245 | 301 | - | - | |
Cla03g00031 | 582 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 305 | 576 | IPR036291 | - | |
Cla03g00031 | 582 | PANTHER | NAD DEPENDENT EPIMERASE/DEHYDRATASE | 299 | 573 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla03g00031 | Cla-Chr3:320249 | Cla10g01236 | Cla-Chr10:27110903 | 3.61E-79 | dispersed | |
Cla03g00031 | Cla-Chr3:320249 | Cla10g00724 | Cla-Chr10:11568652 | 2.79E-92 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla03g00031 | - | - | csv:101204420 | 543.117 |