Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g00128 ATGCTTTCTCTTCTGTGTTTAGTTGGTCTCTTTGTCTTCCTGCTTTGCCTCCAATGGCGCCACCCCAAACACAAACTTCTCCCTCCCGGCTCCATGGGTTGGCCTTATATAGGCGAAACCTTCAAACTTTACACCCAAAACCCGAACTCTTTTTTCTCCATTAGGCAAAAAAGATATGGGGATGTTTTTAAGACACATATATTGGGTTGTCCTTGTGTGATGATTTCAAGTCCAAAGGCTGCAAGAGTTGTGCTTGTGAGTAAGGCTCATCTGTTCAAGCCAACTTATCCACCAAGCAAAGAGAAAATGATAGGTCCTCAAGCTTTGTTCTTCCATCAAGGCCCTTACCATTCTCACCTTAAGAAGTTGATTCAAGCTTCCTTTTTGCCCTCTGCTATTAAAGGCTCTATCTCTCAAATTGAGAACATTGTCCTCCACCTTCTCCCCTCTTGGAATAACTCCCAAATCAACACCTTGCAACAAATGAAAAGGTTTGCTTTTGATGTGGCAATGATATCAGCTTTTGGAGACCAACAAGACTTGGAAATTGAAAGAATCAAACATTTGTACCAATGCCTTGAAAAAGGCTACAATTCTATGCCTCTCGATCTTCCCGGAACTCCTTTCCGCAAAGCAATGAAGGCGAGGAAGGTGCTGAGTGAGACATTGGGGAAATTGATAGAGAAGAGACGGCGGAGCAAAGAGCATGGAGGTGGGTTGCTGGCGGTGCTACTGGGCGGCGGTGGAGAAGAGGCAGAGGATGAGAAAAAGAAGCTGAGTGATTCACAAATAGCAGATAATATAATAGGAGTAATATTTGCGGCACAAGACACGACAGCTAGTGTTTTAACATGGATTCTTAAGTACTTACACGACAATCACCATCTTCTCCAAGCTGTTCAGAAGGAGCAAGAGGCAATTTTTCAAAGGAAAGTGTGCGAAGGAAACCGTGGCCTTTCGTGGGATGATACGAGGCGCATGCCCTTCACTAGTCGGGTGATCCTAGAAACTCTAAGAAGAGCAAGTGTTGTGTCATTCACATTCAGGGAAGCAGTAGAAGAGGTTGAATTTGAAGGTTATTTAATCCCAAGAGGATGGAAAGTTCTTCCACTCTTCAGAACCATTCATCACTCTCCTGATTTCTTCCCACACCCCGAGAACTTTGATCCTTCAAGATTCGAGGTGCCACCTAGACCGAACACATATATGCCATTTGGCAATGGAGTACACTCGTGTCCAGGCAGTGAGATGGCTAAGCTTGAAATGCTTGTTCTTCTCCACCACCTCACCACCACTTACAGGTTTTTCTCTCTCTCCCCCCACTATTTTTTATGGAAAGTGGTGGGAGAGGAATCTGGAATACAATACGGTCCATTTCCTGTACCTAAAGGTGGTTTACCCATAAAAGTATTTTCAAGGAAGAGGAAGATTATTACTTCTTAG 1443 44.01 MLSLLCLVGLFVFLLCLQWRHPKHKLLPPGSMGWPYIGETFKLYTQNPNSFFSIRQKRYGDVFKTHILGCPCVMISSPKAARVVLVSKAHLFKPTYPPSKEKMIGPQALFFHQGPYHSHLKKLIQASFLPSAIKGSISQIENIVLHLLPSWNNSQINTLQQMKRFAFDVAMISAFGDQQDLEIERIKHLYQCLEKGYNSMPLDLPGTPFRKAMKARKVLSETLGKLIEKRRRSKEHGGGLLAVLLGGGGEEAEDEKKKLSDSQIADNIIGVIFAAQDTTASVLTWILKYLHDNHHLLQAVQKEQEAIFQRKVCEGNRGLSWDDTRRMPFTSRVILETLRRASVVSFTFREAVEEVEFEGYLIPRGWKVLPLFRTIHHSPDFFPHPENFDPSRFEVPPRPNTYMPFGNGVHSCPGSEMAKLEMLVLLHHLTTTYRFFSLSPHYFLWKVVGEESGIQYGPFPVPKGGLPIKVFSRKRKIITS 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1278079 1296783 - ClCG03G001340.2 Cla03g00128 268628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g00128 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 405 414 IPR017972 GO:0005506|GO:0016705
Cla03g00128 480 Pfam Cytochrome P450 28 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00128 480 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00128 480 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00128 480 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00128 480 PRINTS P450 superfamily signature 403 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00128 480 PANTHER CYTOCHROME P450 26 5 471 - -
Cla03g00128 480 PANTHER ABSCISIC ACID 8'-HYDROXYLASE 2 5 471 - -
Cla03g00128 480 PRINTS E-class P450 group I signature 283 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00128 480 PRINTS E-class P450 group I signature 263 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00128 480 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00128 480 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00128 480 PRINTS E-class P450 group I signature 402 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00128 480 PRINTS E-class P450 group I signature 412 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00128 480 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00128 480 SUPERFAMILY Cytochrome P450 20 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g00128 480 Gene3D Cytochrome P450 19 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g00128 Cla-Chr3:1278079 Cla07g01055 Cla-Chr7:27115215 0 dispersed
Cla03g00128 Cla-Chr3:1278079 Cla05g02039 Cla-Chr5:32102232 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g00128 K09843 - csv:101216531 856.284