Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g00157 AATCAAAACTCTCCCATGGCGAAAACCCTAATTTCATCTTCACCCTTCGTCGGTTCTTCTCTCCCATCTCTCTCTCGCCATGCTCGTCTCCACACTCTTCCTCACCGGAGACACGTCGCCACCAGAGTCAATTTCAGCTTCCATCAACTTCCCCCCATCCATACCTTTGATTCTGCATTCGATTTTCAAGCAATTGTTAGCAGAGCCGAAGGCCTGCTCTATACACTTGCTGACGCAGCGGTTGCAGTGGATTCCACTCTTTCAGGTGGCGCCGCATCCACTTCCGCTGATACCGCGGTGCAGAAGAATGGCGGATGGTTTGGATTTATCTCCGAGGCCATGGAAGTGGTTCTTAAAGTGTTGAAGGATGGACTTGCGGCTGTGCACGTCCCATATTCATATGGATTTGCAATTATTTTACTTACTGTTATCGTTAAAGTTGCAACTTTTCCCCTCACTAAGCAGCAGGTTGAGTCAACATTGGCTATGCAAAATCTTCAACCGAAGATTAAAGCCATCCAACAAAGATATGCAGGCAATCAGAATCAAAACTCTCCCATGGCGAAAACCCTAATTTCATCTTCACCCTTCGTCGGTTCTTCTCTCCCATCTCTCTCTCGCCATGCTCGTCTCCACACTCTTCCTCACCGGAGACACGTCGCCACCAGAGTCAATTTCAGCTTCCATCAACTTCCCCCCATCCATACCTTTGATTCTGCATTCGATTTTCAAGCAATTGTTAGCAGAGCCGAAGGCCTGCTCTATACACTTGCTGACGCAGCGGTTGCAGTGGATTCCACTCTTTCAGGTGGCGCCGCATCCACTTCCGCTGATACCGCGGTGCAGAAGAATGGCGGATGGTTTGGATTTATCTCCGAGGCCATGGAAGTGGTTCTTAAAGTGTTGAAGGATGGACTTGCGGCTGTGCACGTCCCATATTCATATGGATTTGCAATTATTTTACTTACTGTTATCGTTAAAGTTGCAACTTTTCCCCTCACTAAGCAGCAGGTTGAGTCAACATTGGCTATGCAAAATCTTCAACCGAAGATTAAAGCCATCCAACAAAGATATGCAGGCAATCAGGAAAGAATACAACTTGAGACATCACGACTTTATAGACAAGCAGGAGTTAATCCTTTGGCAGGTTGTTTCCCAACTTTAGCCACCATACCTGTCTGGATTGGCCTATATCAGGCCCTTTCTAATGTGGCAAATGAGGGATTATTGACTGAAGGTTTCTTTTGGATCCCCTCTCTTGGTGGTCCAACTACTATTGCTGCTCGACAAAGTGGATCTGGAATTTCTTGGTTGTTTCCTTTTGTGGATGGCCATCCACCATTGGGCTGGTCTGACACCGCAGCATACCTTGTATTACCTGTTCTCCTCGTCATATCTCAGTATGTATCGATGGAACTGATGAAGCCTCCCCAGACTGATGATCCAGCACAAAAGAACACACTCCTTATTTTCAAGTTTCTTCCCCTCATGATCGGTTACTTCTCCTTGTTCACAAACAATGTTCTCAGCACGGCTCAGCAAGTATGGTTACGCAAGTTAGGAGGTGCAAAGCCTGTTGTAAGTGAGGATGCTGCTGGAATCATAACAGCTGGACGTGCCAAACGAACATCTGAATCAGGAAGAAACGGTGACAGGTTTAGGCAGTTAAGGGAAGATGAGAAGAAGAATAAGTTAAGCAAGGCAGCTCGATCAGAAGAGATTCAAACTTTGGCTTCTGAGTCTGATAATGAGGATGGGTATGATAGGGAGACAATTGAGAAGGGTGAGGACAGTCTAGAAGAGGCATATGCATCAAGTGCAGACAAAGACATCCCAGCCTATAATCGACAAAAGAGAAGCAAACGATCAAAGAGGAAACGTGCAGTATGA 1890 46.24 NQNSPMAKTLISSSPFVGSSLPSLSRHARLHTLPHRRHVATRVNFSFHQLPPIHTFDSAFDFQAIVSRAEGLLYTLADAAVAVDSTLSGGAASTSADTAVQKNGGWFGFISEAMEVVLKVLKDGLAAVHVPYSYGFAIILLTVIVKVATFPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQNQNSPMAKTLISSSPFVGSSLPSLSRHARLHTLPHRRHVATRVNFSFHQLPPIHTFDSAFDFQAIVSRAEGLLYTLADAAVAVDSTLSGGAASTSADTAVQKNGGWFGFISEAMEVVLKVLKDGLAAVHVPYSYGFAIILLTVIVKVATFPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCFPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGSGISWLFPFVDGHPPLGWSDTAAYLVLPVLLVISQYVSMELMKPPQTDDPAQKNTLLIFKFLPLMIGYFSLFTNNVLSTAQQVWLRKLGGAKPVVSEDAAGIITAGRAKRTSESGRNGDRFRQLREDEKKNKLSKAARSEEIQTLASESDNEDGYDRETIEKGEDSLEEAYASSADKDIPAYNRQKRSKRSKRKRAV 629
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1644480 1652102 + ClCG03G001650.1 Cla03g00157 268657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g00157 629 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 314 510 IPR028055 -
Cla03g00157 629 PANTHER INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC 187 623 - -
Cla03g00157 629 MobiDBLite consensus disorder prediction 537 629 - -
Cla03g00157 629 MobiDBLite consensus disorder prediction 544 569 - -
Cla03g00157 629 Pfam 60Kd inner membrane protein 315 517 IPR001708 GO:0016021|GO:0032977
Cla03g00157 629 Pfam 60Kd inner membrane protein 134 188 IPR001708 GO:0016021|GO:0032977
Cla03g00157 629 PANTHER INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC 6 183 - -
Cla03g00157 629 PANTHER OXA1 187 623 IPR001708 GO:0016021|GO:0032977
Cla03g00157 629 MobiDBLite consensus disorder prediction 582 604 - -
Cla03g00157 629 PANTHER OXA1 6 183 IPR001708 GO:0016021|GO:0032977
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g00157 Cla-Chr3:1644480 Cla08g01713 Cla-Chr8:29692859 1.68E-34 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g00157 K03217 - csv:101217620 768.844