Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g00202 ATGGAGAATGATTCTTCTTCCGCTATGGAAATCAAAGGCCTTCCCACTTACGACGGCAAATACTTACTCTACAATGTTCTCGGCAACTTCTTCGAGGTCTCTGCCAAGTACTCCCCTTCAATTCAACCTGTTGGACGCGGTGCTTACGGCATTGTTTGTTCTCCTTATGATTGTACGACCAATTCTGAGACGAAAGAAGAGGTAGCGATTAAGAAGATTGGGAATGCTTTTGATAATAGGATTGATGCCAAGAGGACCCTTCGTGAGATTAAACTCCTTTGCCATATGGATCATGACAATATTATAAAAATCAAAGATATAATTCCTCCACCAGAGAAGGAGAAATTCAATGATGTGTATATTGTGTATGAATTAATGGACACTGACCTGCACCAGATCATACGCTCTACCCAGGCTCTGACAGACGATCACTGTCAGTACTTCTTATACCAATTACTGCGAGGTTTGAAGTATTTACACTCTGCAAATGTCTTGCACCGAGATCTAAAACCAAGCAACTTGCTTCTTAATGCAAATTGTGACCTCAAGATTTGTGATTTTGGGTTAGCAAGAACAACATCAGAGACAGATTTCATGACAGAATATGTTGTAACACGATGGTATCGAGCCCCTGAGCTACTACTCAACACTTCTGAATACACAGCAGCAATAGATATTTGGTCGGTTGGATGTATTCTCATGGAAATTCTTAGGAGGGAGCCACTGTTCCCTGGTAAAGACTATGTGCAGCAATTGGGGCTTATAACTGAGTTGCTAGGTTCACCAGATGACTCAGATCTTGGGTTTCTTAGAAGTGATAATGCAAGGAAGTATGTTAAGCAACTTCCTTATTTCCCGAAACAACCACTAACCGAAAAGTTCCCAGATCTTCCTCCACTAGCAGTTGATCTTGCAGAGAGGATGCTGCTCTTTGATCCAAGCAAGAGAATAACCGTCGAGGAGGCGATGAATCACCCATATATAGTAAGTCTTCATGAAATCAATGAAGAACCAACCTGCCCTTCTCCTTTCAACTTCGATTTCGAACAGGCATCCTTGGATGAAGAAGACATAAAAGAGCTTATATGGAGGGAGTCTCTCAATTTCAATCCAAATCACATTTAG 1125 41.42 MENDSSSAMEIKGLPTYDGKYLLYNVLGNFFEVSAKYSPSIQPVGRGAYGIVCSPYDCTTNSETKEEVAIKKIGNAFDNRIDAKRTLREIKLLCHMDHDNIIKIKDIIPPPEKEKFNDVYIVYELMDTDLHQIIRSTQALTDDHCQYFLYQLLRGLKYLHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNTSEYTAAIDIWSVGCILMEILRREPLFPGKDYVQQLGLITELLGSPDDSDLGFLRSDNARKYVKQLPYFPKQPLTEKFPDLPPLAVDLAERMLLFDPSKRITVEEAMNHPYIVSLHEINEEPTCPSPFNFDFEQASLDEEDIKELIWRESLNFNPNHI 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2273884 2277113 + ClCG03G002080.2 Cla03g00202 268702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g00202 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Cla03g00202 374 SUPERFAMILY Protein kinase-like (PK-like) 41 334 IPR011009 -
Cla03g00202 374 Gene3D Phosphorylase Kinase; domain 1 21 365 - -
Cla03g00202 374 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 17 373 - -
Cla03g00202 374 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 17 373 - -
Cla03g00202 374 Pfam Protein kinase domain 41 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla03g00202 374 ProSitePatterns MAP kinase signature. 77 180 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cla03g00202 374 Gene3D Transferase(Phosphotransferase) domain 1 126 355 - -
Cla03g00202 374 ProSiteProfiles Protein kinase domain profile. 38 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla03g00202 374 SMART serkin_6 38 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00234 Cla-Chr1:2370951 Cla03g00202 Cla-Chr3:2273884 0 dispersed
Cla03g00202 Cla-Chr3:2273884 Cla06g00323 Cla-Chr6:4131335 0 dispersed
Cla03g00195 Cla-Chr3:2172289 Cla03g00202 Cla-Chr3:2273884 4.66E-167 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80407 PF00069 Pkinase 8.10E-68 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g00202 K04371 - csv:101218403 725.317