Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g00241 ATGATTGCAGCAGCAGGGTCGAGCTCCAATGGCGGAATTGGGAGCGGAGAATTGGCCAATTTTGTCCGGCAAGTGGTGGTGGGGCGGTGGTTTTCTCTTTTTGCTTCGTTCCTTGTAATGACCGGCGCCGGCGGAGTTTATTTGTTCGCTTATTACTCTAGAGACATCAAAAAGACGCTCCAATGTGATCAAACGACACTAAACAAAATTGGGTTTTACAAAGATTTGGGATCCAACGTGGGCGTTATTGCCGGACTTCTGGCGGAGGTGGCGCCAACTTGGCTCGTTCTTCTCATCGGCGCCGCCTTCAATTTTCTTGGCTACTTTAAGATATGGCAAGCCGTCACCGGAAAAATTGTTCAGCCCACCGTCGCCTTCTTTTGCTTTTACATGATGGTTGGAGCTAACTCTCAGAATTTTGCCAATACAGGAGTGCTTGTCACGTGCGTGAAGAACTTCCCAGAAAGAAGAGGAGTGATGTTGGGCCTTCTTAAGGGCTTTGTGGGCCTAAGCGGAGCTATCATGACCCAACTTTACATTGCGATTTACGGCCACGATACCAAATCTCTTGTTCTTCTAATCGCCTGGTTTCCTTCTATAATCTCTTTGATCTTCGTCTACACAATCAGAGAAATCAAAGCCGTAAAACACCCAAATGAATTTAGAGTTTTCGTTCAATTCCTTTGCGTCACAGTCCTTTTAGCCATCTTCCTCACCGTCTTAGTCTTCGTTCAAAAACGAGTCCGATTCCATCAATCAGCTCACATCGCCATTGTCTCTGCCATTCTTGCTCTGCTTTTTGTTCCATTGTTAATCGCCATTAGAGAAGAACTCCTTCTCTGGAATCTCAATAAACGAACTATTCCTACAAACCCTTTCACCAGAATTAGAATCGAAAACAACCCCCAGACAACAACAACCCCAATTCCTTCTTCAAATCAAACTCAATTCAGTTCTTGTTTCGCTAACATTTTCAACAAACCCGAAAGAGGCGAAGATTACACAGTTCTTCAAGCGATTTTCAGTATCGATATGCTTATTTTATGTTCCGCTATGTTAATCGGCGTCGGTGCAAGCTTAACCGCCATTGACAATCTAGGGCAAATCGGTGAATCCCAAGGCTACCCATCTGAAACAATCAACTCATTCATCTCTTTAGTAAGTATTTTCAACTTCACTGGTAGAATCTTTTCTGGGTTCGTCTCGGAAATCTTGCTTGAGAAATTCAAATTCCCTAGGCCATTGATGCTCACACTCATCCTCTTGATTTCCTGTATTGGGCATCTTTTGGTAGCCTTTCCCTTTGAGGATTCGCTCTTCGTTGCTTCAATCATAATTGGATTTTCAATGGGGTCTCAAGTTCCATTGCATTTCGCGATGATTTCAGAGATTTTTGGGCTGAAACATTACTCGACTTTGTTTAATTTTGGGCAATTGTCTTGTCCAATTGGGTCTTATATTCTGAATGTAATGGTGACTGGGAAGATGTATGATAAGGTAGCGCAATTGGGGAGTAATCCAAACAAGTTTCATTGTGCAGGAAGTCATTGTTATGAACAATCGTTTTTGATTTTGGGTGGATTAACGTTTATTGTAGCGATGATATCGTTGGTTTTGGTGATGAGGACGAGGGATTTTTATAGAGGGGATATATACAAGAAATTCAGGGAAGATATGGAATCTTTGAAGACGGAAGTCGAGTTTTACAAAGTGAATGAGAAGAGGACTAGGATTGGGAATTTACTTGTTGATAAACATACCATCAATTTCAAGAGGTGA 1779 42.33 MIAAAGSSSNGGIGSGELANFVRQVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKKTLQCDQTTLNKIGFYKDLGSNVGVIAGLLAEVAPTWLVLLIGAAFNFLGYFKIWQAVTGKIVQPTVAFFCFYMMVGANSQNFANTGVLVTCVKNFPERRGVMLGLLKGFVGLSGAIMTQLYIAIYGHDTKSLVLLIAWFPSIISLIFVYTIREIKAVKHPNEFRVFVQFLCVTVLLAIFLTVLVFVQKRVRFHQSAHIAIVSAILALLFVPLLIAIREELLLWNLNKRTIPTNPFTRIRIENNPQTTTTPIPSSNQTQFSSCFANIFNKPERGEDYTVLQAIFSIDMLILCSAMLIGVGASLTAIDNLGQIGESQGYPSETINSFISLVSIFNFTGRIFSGFVSEILLEKFKFPRPLMLTLILLISCIGHLLVAFPFEDSLFVASIIIGFSMGSQVPLHFAMISEIFGLKHYSTLFNFGQLSCPIGSYILNVMVTGKMYDKVAQLGSNPNKFHCAGSHCYEQSFLILGGLTFIVAMISLVLVMRTRDFYRGDIYKKFREDMESLKTEVEFYKVNEKRTRIGNLLVDKHTINFKR 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2872135 2874256 - ClCG03G002480.1 Cla03g00241 268741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g00241 592 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 563 - -
Cla03g00241 592 Coils Coil 552 572 - -
Cla03g00241 592 Pfam Nodulin-like 29 274 IPR010658 -
Cla03g00241 592 SUPERFAMILY MFS general substrate transporter 33 548 IPR036259 -
Cla03g00241 592 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 14 563 - -
Cla03g00241 592 Gene3D MFS general substrate transporter like domains 318 546 IPR036259 -
Cla03g00241 592 CDD MFS_Mch1p_like 28 533 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g00241 Cla-Chr3:2872135 Cla03g00247 Cla-Chr3:2913026 0 dispersed
Cla03g00241 Cla-Chr3:2872135 Cla03g00243 Cla-Chr3:2883090 1.07E-39 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g00241 - - csv:101202941 1012.68