Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g00267 ATGGCTTCCTTATCAGTGGCCACTGTTTTATCCCGTCTCTCTCGTTTGGGGTTTGCTTCGAGATCTTCTTTAAACCCATTATTTATCCCCCCCAGTAGTAGTAGAATCGAGAAATTGAATCGATTCCGGCCCTTCTCCATGGCTTCGTCTTCCAAAGACTCTCCAGCCAACAATCCAGGACTTCATTCTACCCCCGATGATGCTACTAAAGGTTACCTCATGCAACAGACTATGTTTCGGATTAAGGATCCTAAAGCCAGTCTCGACTTCTATTCTCGAGTTCTGGGCATGTCATTACTCAAGAGGCTGGATTTCCCTGAAATGAAGTTTAGCTTGTACTTTATGGGTTATGAGGATACTGCTTCTGCACCAGAAAGCTCAGTTGATAGAACAGTGTGGACTTTTGGTCGAAAGGCTACAATTGAGTTAACACACAACTGGGGTACTGAAAGTGACCCTGAATTCAAAGGATATCATAATGGGAACTCAGATCCTCGAGGCTTTGGGCACATTGGCATAACTGTTGATGACACAATTAAGGCATGTGAAAGATTTGAACGCCTAGGTGTGGAATTTGTTAAAAAACCAGATGACGGTAAGGCACCTCGTCTCAGATCACTGTCAAAAGATCTAGTTAGAATCCCTATTGAATGTGCTTCAATGGTTCTCTGCTTGCTGATTGTCAGCCGCAAGATGAAAGGAATTGCATTTATCAAGGATCCTGATGGCTACTGGATTGAAATCTTCGACCTCAAAACTATTGGAAAACTTACTTCTGACGCTGCTTGA 789 43.22 MASLSVATVLSRLSRLGFASRSSLNPLFIPPSSSRIEKLNRFRPFSMASSSKDSPANNPGLHSTPDDATKGYLMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPESSVDRTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTIKACERFERLGVEFVKKPDDGKAPRLRSLSKDLVRIPIECASMVLCLLIVSRKMKGIAFIKDPDGYWIEIFDLKTIGKLTSDAA 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3187401 3192327 + ClCG03G002770.1 Cla03g00267 268767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g00267 262 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 76 248 IPR004360 -
Cla03g00267 262 PANTHER LACTOYLGLUTATHIONE LYASE 33 257 - -
Cla03g00267 262 ProSitePatterns Glyoxalase I signature 1. 76 97 IPR018146 GO:0004462|GO:0046872
Cla03g00267 262 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 33 257 - -
Cla03g00267 262 MobiDBLite consensus disorder prediction 47 67 - -
Cla03g00267 262 Gene3D - 46 256 IPR029068 -
Cla03g00267 262 ProSitePatterns Glyoxalase I signature 2. 161 177 IPR018146 GO:0004462|GO:0046872
Cla03g00267 262 MobiDBLite consensus disorder prediction 47 64 - -
Cla03g00267 262 CDD GlxI_Zn 74 249 - -
Cla03g00267 262 TIGRFAM glyox_I: lactoylglutathione lyase 62 201 IPR004361 GO:0004462|GO:0046872
Cla03g00267 262 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 63 250 IPR029068 -
Cla03g00267 262 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 73 251 IPR037523 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g00267 Cla-Chr3:3187401 Cla11g00208 Cla-Chr11:2419136 9.65E-10 dispersed
Cla03g00267 Cla-Chr3:3187401 Cla06g00883 Cla-Chr6:13553551 3.82E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g00267 K01759 - mnt:21403510 364.385