Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g00402 ATGACTTCAAGAGTGGAAATCGATGAGGACTGTGAAATGAGGGGAAGTATGTGGGTTCTAGATCAGAAGCTCGATCAGCCAATGGATGAAGAAGCTGGGAGACTTAGTAATATGTACAAAGAGAAGAAATTCTCAGTATTGTTGCTTCTTCGACTTGCATATCAAAGCCTTGGAGTGGTTTATGGAGATTTGGGGACTTCTCCCCTGTACGTTTTCTACAATACATTTCCTCGTGGGATTTCTGATCCAGAGGATGTAGTTGGAGCACTTTCTTTGATTATATACTCACTCACTCTCATTCCACTCATAAAGTATGTATTTATCGTGTGTAAAGCAAATGACAATGGTCAAGGTGGAACATTTGCTCTCTACTCCTTGCTGTGTCGTCATGCAAAAGTTAAAACTATTCCAAACCAACATCGAACTGACGAGGAGCTAACAACATATAGCCGTTCTAAATTTCATGAGCAATCATTTGCTGCTAAAACTAAAGGATGGCTTGAAAAACAATCATCCAGGAAGAATGCATTGCTCATTCTTGTCCTTGTTGGCACTTCCATGGTAGTTGGAGATGGAATTCTCACTCCTGCAATATCGGCTAGCTATTTCACTAGTAATTGGGTAGAGCTTGTGGCTGCATCTGCACTTTCACACGTTAGCATTTTATCCGCTGCGGGAGGGATCAAAGTAAACCACCCCCATGTGAGCAGTGATGTAGTTGTGCTTGTTGCTGTTGTAATACTAGTAGGATTATTCAGCTTGCAACGCTATGGTACTGATAGAGTTGGTTGGCTCTTTGCTCCAGTTGTGCTACTATGGTTTCTATTAATTGGAGGTATAGGCATGTTCAACATCTGGAAATATGATAAAACCATTCTAAGAGCCTTTTCACCTGTGTATATTTTTCGCTATTTTAGAAGGCGAGGGATGGATGGTTGGACGTCCCTCGGAGGTGTACTGCTGAGTATAACAGGCACAGAGGCTCTATTTGCCGATCTGGCTCATTTTCGTGTAGCAGCTGTACAGATTGCTTTTACAGTAGTTGTTTTTCCTTGCCTTCTCTTGGCCTATTCTGGACAGGCTGCCTACCTTATTAACAATACGGACCATGTAGTTGATGCCTTCTATCGTTCAATCCCAGAAACCATATACTGGCCCGTGTTTGTTGTTGCAACTGCTGCTGCTGTAGTTGCTAGTCAAGCCACTATATCTGCAACATTTTCAATAATCAAGCAGGCTCTTGCTCATGGCTGCTTTCCAAGAGTTAAAGTTGTTCATACCTCAAAGAATTTCCTTGGTCAGATTTATGTTCCAGATATTAACTGGATCCTCATGATTCTTTGTATTGCTGTGACCGCAGGATTTAAGAATCAAAGTCAAATTGGAAATGCTTATGGGACAGCGGTTGTGGTAGTCATGCTTGTGACCACACTGCTCATGATTCTAATCATGATCTTGGTGTGGCGCTGTCATTGGATCATTGCCATGATTTTCACTGGACTGTCGCTTGTCGTGGAGTGCAGTTACTTTTCTGCTGTTCTCTTCAAGGTTGATCAAGGTGGCTGGGTCCCCCTTGTGATTGCTGGAGCTTTTCTTGTCATCATGTATGTGTGGCATTATGGTACTGTTAAACGATACGAATTCGAGCTGCACAGTAAAGTCTCAATGGCATGGGTTCTTGGGCTTGGTCCCAGTCTGGGACTAGTCCGTGTTCCTGGAATTGGACTTGTGTATACTGAGCTAGCAAGCGGCGTACCTCACATATTTTCCCATTTCATTACGAATCTGCCTGCCATCCATTCTGTTGTTGTGTTTGTCTGCGTGAAATATCTTCCAGTCTACACAGTGCCAGAGGAAGAAAGGTTCCTGGTAAAGCGGATAGGACCAAAGAATTTCCACATGTTTCGTTGTGTTGCAAGATACGGTTATAAAGACCTCCATAAAAAGGATGACGATTTTGAGAAAAAGCTTTTTGATAGCATCTTCCTCTTTGTCAGGCTTGAATCCATGATGGAAGGTTGTTCGGACTCTGATGAGTACAGTTTGTATGGCCAGCAAACTGAGCATTCTAGGGATGGCCTGTTGATTGGCAACCATGGAAATGCAGCTTCACCCAATGTGGACACAACATTCTCATCAGTTGACTCAATCGTGCCAGTTAGATCTCCGATGCATATGAATAGCACGGTAAGATCATCTGAGCAAGCAAGCAACCATACCGATAGCGATGAGATTGAATTCTTGATGAGGTGTAGAGATGCTGGGGTGGTGCACATACTGGGAAACACTAATCTTGCAAGCTGCCTTTTCTTGTGTAAAAGGAAGCCGCTCATTGTGGTGTTTGGACCAAATTCCGATCTAATAAGAGAAGAAAACAAGGACAGAGAAGTTGTGAAAACCCTCGGGAGTCGGGAGTTCCGCTTTCAACGATGCCACTACAAGACTGATGATCCATTTCAGTACGCTCTTTTTGAACTTATGAACTTCCAAGTGAAATTACGACGAAAATTTGGGCGATATTTGCTCATTACCCTACGCAATGCAGCTTTGTCGAAGACAATTAATTTGTCACCTTCTTCTGTAGCTACCTCCGGACATTATTCATTTTCATTTCGAATTCACCTCAGCTTCATTCTGGTTGATGAACAAGTTTATCCTTCCGAATTTCTTCTTCGTCGTCGTCTTCTTCTTCTTCCGGCTGTTTTCCTGATTTCTGATGTGTTTTTTCCTGTTTGCCTGTATTTGGAGTTCTGGGTTTTCCGGGGTTCTGTTGAAACTTATTGGTGGGATTCCCTTTTCTTTTTCTACTCAAAGATTGAAAGCAAATCAATCTCACAGCGTTTTGGAAATACCGTTGAGTTGTTGTGA 2868 42.64 MTSRVEIDEDCEMRGSMWVLDQKLDQPMDEEAGRLSNMYKEKKFSVLLLLRLAYQSLGVVYGDLGTSPLYVFYNTFPRGISDPEDVVGALSLIIYSLTLIPLIKYVFIVCKANDNGQGGTFALYSLLCRHAKVKTIPNQHRTDEELTTYSRSKFHEQSFAAKTKGWLEKQSSRKNALLILVLVGTSMVVGDGILTPAISASYFTSNWVELVAASALSHVSILSAAGGIKVNHPHVSSDVVVLVAVVILVGLFSLQRYGTDRVGWLFAPVVLLWFLLIGGIGMFNIWKYDKTILRAFSPVYIFRYFRRRGMDGWTSLGGVLLSITGTEALFADLAHFRVAAVQIAFTVVVFPCLLLAYSGQAAYLINNTDHVVDAFYRSIPETIYWPVFVVATAAAVVASQATISATFSIIKQALAHGCFPRVKVVHTSKNFLGQIYVPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVVVMLVTTLLMILIMILVWRCHWIIAMIFTGLSLVVECSYFSAVLFKVDQGGWVPLVIAGAFLVIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDDDFEKKLFDSIFLFVRLESMMEGCSDSDEYSLYGQQTEHSRDGLLIGNHGNAASPNVDTTFSSVDSIVPVRSPMHMNSTVRSSEQASNHTDSDEIEFLMRCRDAGVVHILGNTNLASCLFLCKRKPLIVVFGPNSDLIREENKDREVVKTLGSREFRFQRCHYKTDDPFQYALFELMNFQVKLRRKFGRYLLITLRNAALSKTINLSPSSVATSGHYSFSFRIHLSFILVDEQVYPSEFLLRRRLLLLPAVFLISDVFFPVCLYLEFWVFRGSVETYWWDSLFFFYSKIESKSISQRFGNTVELL 955
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4600153 4613211 - ClCG03G004260.2 Cla03g00402 268902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g00402 955 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 2 200 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cla03g00402 955 PANTHER POTASSIUM TRANSPORTER 2 200 - -
Cla03g00402 955 PANTHER POTASSIUM TRANSPORTER 218 765 - -
Cla03g00402 955 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 218 765 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cla03g00402 955 Pfam K+ potassium transporter 54 199 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cla03g00402 955 Pfam K+ potassium transporter 219 645 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cla03g00402 955 TIGRFAM kup: potassium uptake protein 219 675 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g00402 Cla-Chr3:4600153 Cla05g01317 Cla-Chr5:16070873 0 dispersed
Cla03g00401 Cla-Chr3:4595247 Cla03g00402 Cla-Chr3:4600153 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g00402 K03549 - csv:101217915 1369.76