Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g00485 ATGTCAGCTTATTTGTGGAAAAGCTTCGACGAGGATGAAGATCGACCCGAGAAGCCGCGGCGATGTGGAGTTACAGAGATGAGAGGCCCTCATTATACTCTTTCGAGCCAAAATGTTATTCAGGAAATTTTCGAGTCTGTGGGTCAATTTGTCGATGGGTTAAAGTTCTCCGGGGGTTCTCACAGCCTATTGCCGAGGGATTTTATGAAAGAGGTGACGGAAATGGCTCATCGACATGACATCTATGTCAGTACGGGTGACTGGGCGGAGCATTTACTACGCAAAGGTCCATCTGGTTTCAAAGAGTATGTGGAGGAATGTAAGCTCTTAGGATTTGACACTGTTGAGCTCAACGTGGGATCACTTGAAGTTCCTGAAGAAACTCTTCTGAGATACGTGCGTTTGATTAAGAACGGTGGCCTTAGGGCTAAGCCTCAGTTCGCAGTGAAGTTCAACAAGTCCGACATTCCCATCAGTGGCAATCGAGCATTTGGAGCTTATATTGTTCCGAGACCACGATCTTCTGGTAAGGTTGCCATTTGCAGATCTGTTCTTTCTCAAGAAATGGAACTTGTAGAAGATGTTGATCTTTTGATCAGAAGGGCTGAGAGATGCCTAGAAGCTGGGGCAGACATGATTATGATTGATGCAGATGATGTCAGTAAACATGCCGATTCTCTTCGAGCAGATATTATTGCCAAGATCATTGGGCGTCTTGGTCTAGAGAAAACGATGTTTGAAGCATCGAATCCCAGAACATCAGAGTGGTTTATCAATCATTACGGTCCAAAGGTGAATCTTTTTGTGGATCACTCTCAAGTTATGGATCTGGAGTGCCTCCGGGGTCGCAACCTCGGTAAAAATCATTCATCTATTCTTGGTTCCTCCTACTTTCGGATGTAA 903 44.96 MSAYLWKSFDEDEDRPEKPRRCGVTEMRGPHYTLSSQNVIQEIFESVGQFVDGLKFSGGSHSLLPRDFMKEVTEMAHRHDIYVSTGDWAEHLLRKGPSGFKEYVEECKLLGFDTVELNVGSLEVPEETLLRYVRLIKNGGLRAKPQFAVKFNKSDIPISGNRAFGAYIVPRPRSSGKVAICRSVLSQEMELVEDVDLLIRRAERCLEAGADMIMIDADDVSKHADSLRADIIAKIIGRLGLEKTMFEASNPRTSEWFINHYGPKVNLFVDHSQVMDLECLRGRNLGKNHSSILGSSYFRM 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5368950 5371176 + ClCG03G005150.1 Cla03g00485 268985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g00485 300 PANTHER PROTEIN HEAT-STRESS-ASSOCIATED 32 13 300 - -
Cla03g00485 300 Gene3D Aldolase class I 8 288 IPR013785 -
Cla03g00485 300 MobiDBLite consensus disorder prediction 1 20 - -
Cla03g00485 300 Pfam (2R)-phospho-3-sulfolactate synthase (ComA) 14 285 IPR003830 -
Cla03g00485 300 PANTHER REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED 13 300 - -
Cla03g00485 300 SUPERFAMILY (2r)-phospho-3-sulfolactate synthase ComA 13 281 IPR036112 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g00485 - - csv:101208408 550.821