Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g00592 ATGGATAATGGTGATATTGAGAGCGGGGAAGAGGAATTTCATGGGCAGAGGGGTAGGAAGTATCGCCCTGTCGAAGCCCATGATCGTGCTGTTCTTGAAATGTCTTCCATGGATCCGGGTTCCTCATCTTCTTCCTCCTCCATTCCCCCCTTGCGCCAACCTTCTCTCAAGAAGGTAAAAGTGGGTTCTCAGACCGGCACTGAAATAGAAGGGAACTCTCCTACTCGTATTGAAGTCAATGGCCCGCAGCGAGAATCCAAACTGGAGTTTTTTGGTTTTGATTCTCTGGTTAATATTCTTGGCCTTAAGAGTATGATGGGCGAACAAATTCAAGCGCCTTCTAGTCCTCGAGATGGTGAGAATGTTTCTATCACTCAGGGGTTGCCAAAGACCAATGAAGTCAAATCGGGTACATTGATGGGTGTATTTATCCCATGCTTGCAGAACATATTGGGAATCATTTACTATATTCGATTTTCTTGGATTGTTGGCATGGCTGGCATTGGTGAGTCATTAGTGCTGGTGGCGTTTTGTGGTTTATGTACGTTCTTGACTTCGATTTCACTAAGTGCTATTGCAACTAATGGAGCTATGAAGGGTGGGGGTCCATATTATCTGATAGGTCGTGCCCTTGGTCCAGAGGTTGGAGTTAGCATTGGGCTATGTTTCTTTCTCGGAAATGCAGTTGCTGGTGCGCTTTATGTGTTGGGAGCTGTAGAAACATTTTTGAATGCTGTCCCAGCTGCAGGGATTTTCAGAGAGACTGTAACAAAAGTTAACGGAACAACTGTTGCAGAGCCAATACAAAGCCCAAGTTCACATGACTTGCAAGTTTATGGCATTATTGTGACGATTCTTCTGTGCTTCATTGTGTTTGGTGGTGTGAAAATGATTAATAGGGTTGCTCCTGCTTTCCTTATTCCAGTCTTGTTCTCAGTACTTTGCATATTTCTTGGAATTTTTCTGGCAAGGAAAAACGACCCAGCAGAGGGCGTCACAGGTTTGAGTTTGGAATCTTTTAAAGAAAATTGGAGTTCTGATTATCAGATGACTAATAGTGCTGGAATTCCTGATCCTTTTGGAAAAGTATACTGGAATTTCAATGCTTTGGTTGGTCTTTTTTTCCCTGCTGTGACGGGAATAATGGCTGGTTCTAATAGATCGGCTTCACTGAAGGATACTCAGCGTTCAATTCCTATTGGAACATTGGCTGCAACTCTAACAACAACTGCATTGTATCTGATCTCTGTTTTGCTGTTTGGAGCACTGGCAACCAGAGAGAAATTGTTGACAGATAGGCTTCTTACTGCTACGGTTGCTTGGCCTTTCCCAGCAATTATTTACGTTGGAATTATTTTATCAACCCTTGGAGCTGCCCTTCAGAGCCTGACAGGAGCCCCTCGCTTACTAGCAGCCATAGCCAATGATGATATATTGCCTATTCTAAACTATTTTAAAGTAGCAGATGGCAGTGAGCCATACTTTGCGACCCTCTTTACTGCATTTCTCTGCATCGGATGTGTCATTATTGGGAATCTTGATCTTATCACACCAACTGTAACCATGTTTTTCCTACTGTGTTATGCTGGTGTGAACTTATCCTGCTTCCTTTTGGATCTACTAGACGCTCCCAGTTGGCGTCCACGCTGGAGATTCCACCACTGGAGCCTTTCTCTTCTTGGAGCATCACTTTGTGTAGTGATAATGTTCTTGATCTCGTGGTCATTCACGATAGTGTCTCTAGCCCTTGCAAGCCTTATATATTATTATGTGTGCCTTAGAGGCAAGGCTGGAGACTGGGGTGATGGTTTCAAGAGTGCATATTTCCAACTTGCTCTCCGTAGTCTTCGTTCGCTTGGAGCGAGCCAAGTCCACCCAAAGAATTGGTATCCCATTCCCTTGATATTTTGCCGGCCATGGGGAAAGCTGCCCGAAAATGTACCATGTCACCCTAAACTTGCAGACTTTGCAAACTGCATGAAGAAAAAAGGCCGGGGAATGTCCATATTTGTCTCCATACTAGATGGAGATTACCATGAACGGGTTGAAGATGCAAAAGCTGCCTGCAAGCAGCTTGCTACATATATCGATTACAAACGTTGTGAAGGTGTGGCAGAGATTGTTGTGGCTCCCACAATGTCTGAAGGTTTCCGGGGGATTGTTCAGACGATGGGTCTTGGAAATCTCAAGCCGAATATTGTAGTCATGCGATACCCTGAAATTTGGCGTCGTGAAAACCTAATAGAAATTCCAGCTACTTTTGTTGGAATAATCAATGACTGCATTGATGCCAACAAGGCAGTTGTCATTGTTAAGGGTCTGGATGAATGGCCTAATGAATTTCAAAGGCAATATGGAACTATAGACTTGTATTGGATTGTGAGAGATGGTGGTCTTATGCTTCTCCTCTCTCAGCTTCTCCTTACAAAGGAGAGCTTTGAGAGTTGTAAGATTCAGGTGTTCTGCATTGCAGAGGAGGATTCTGACGCGGAGGGCCTCAAAGCTGATGTCAAAAAGTTTTTGTATGATCTTCGGATGCAAGCTGAGGTGATTGTTATAACAATAAAATCATGGGACACACAAGTGGAGGGCGCGCAACCAGACGAATCAATGGAAGCCTTCAGTGCTGCTCAAGGGAGGATTGCTAGTTATTTAAGTGAAATGAAGGCAACAGCTGAGAGCAGAGGAACCACACTCATGGCTGATGGGAAGCCTGTGAGTGTGAATGAGCAGCAGGTTGAGAAGTTTCTAAATACAACTCTCAAGTTGAACTCAACGATTCTAAGATACTCCAGGATGGCTGCGGTTGTGCTCGTCAGCCTCCCACCACCCCCTGTCAACCATCCTGCTTACTTCTATATGGAGTACTTGGATTTGTTGGTTGAGAATGTGCCTAGGCTCTTGATCGTAAGAGGATACCGTCGAGATGTCGTAACTTTGTTCACCTAG 2949 44.42 MDNGDIESGEEEFHGQRGRKYRPVEAHDRAVLEMSSMDPGSSSSSSSIPPLRQPSLKKVKVGSQTGTEIEGNSPTRIEVNGPQRESKLEFFGFDSLVNILGLKSMMGEQIQAPSSPRDGENVSITQGLPKTNEVKSGTLMGVFIPCLQNILGIIYYIRFSWIVGMAGIGESLVLVAFCGLCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLNAVPAAGIFRETVTKVNGTTVAEPIQSPSSHDLQVYGIIVTILLCFIVFGGVKMINRVAPAFLIPVLFSVLCIFLGIFLARKNDPAEGVTGLSLESFKENWSSDYQMTNSAGIPDPFGKVYWNFNALVGLFFPAVTGIMAGSNRSASLKDTQRSIPIGTLAATLTTTALYLISVLLFGALATREKLLTDRLLTATVAWPFPAIIYVGIILSTLGAALQSLTGAPRLLAAIANDDILPILNYFKVADGSEPYFATLFTAFLCIGCVIIGNLDLITPTVTMFFLLCYAGVNLSCFLLDLLDAPSWRPRWRFHHWSLSLLGASLCVVIMFLISWSFTIVSLALASLIYYYVCLRGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHERVEDAKAACKQLATYIDYKRCEGVAEIVVAPTMSEGFRGIVQTMGLGNLKPNIVVMRYPEIWRRENLIEIPATFVGIINDCIDANKAVVIVKGLDEWPNEFQRQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCIAEEDSDAEGLKADVKKFLYDLRMQAEVIVITIKSWDTQVEGAQPDESMEAFSAAQGRIASYLSEMKATAESRGTTLMADGKPVSVNEQQVEKFLNTTLKLNSTILRYSRMAAVVLVSLPPPPVNHPAYFYMEYLDLLVENVPRLLIVRGYRRDVVTLFT 982
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6760800 6774629 - ClCG03G006310.1 Cla03g00592 269092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g00592 982 Gene3D Amino acid/polyamine transporter I 134 599 - -
Cla03g00592 982 Pfam Solute carrier family 12 782 981 IPR018491 GO:0006811|GO:0016020|GO:0022857
Cla03g00592 982 Pfam Solute carrier family 12 651 772 IPR018491 GO:0006811|GO:0016020|GO:0022857
Cla03g00592 982 MobiDBLite consensus disorder prediction 1 79 - -
Cla03g00592 982 MobiDBLite consensus disorder prediction 36 79 - -
Cla03g00592 982 Pfam Amino acid permease 141 617 IPR004841 GO:0016020|GO:0055085
Cla03g00592 982 TIGRFAM 2a30: K-Cl cotransporter 74 982 IPR004842 GO:0006811|GO:0015377|GO:0016021
Cla03g00592 982 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 13 981 IPR004842 GO:0006811|GO:0015377|GO:0016021
Cla03g00592 982 MobiDBLite consensus disorder prediction 8 32 - -
Cla03g00592 982 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 13 981 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g00592 K14427 - csv:101216218 1855.49