Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g00677 ATGGTAGTCGAAGAGACGATCAAAGCTACATCCACGGAAGATCTTTCTAATACCATTGCAAATCAAAACCCTAGAGGACGAGGCGGTGATGAAGATGAGGAACTTGAGGAAGGAGAGATCGTCGGAGACGACGACCTTGACTCGTCCAATTTGTCGGCGGCGATAGTGCATCAGCCTCACCCTCTTGAGCACTCTTGGACCTTTTGGTTCGATAACCCATCCGCCAAGTCTAAGCAAGCCACCTGGGGTGCGTCTATCCGACCGATCTATACCTTCTCTACTGTTGAGGAGTTTTGGAGTGTTTACAACAATATTCATCATCCAAGCAAATTGGCGTTGAGGGCAGATTTGTACTGCTTCAAACATAAAATTGAGCCTAAATGGGAAGATCCTGTTTGTGCGAATGGAGGGAAATGGACTGTAAACTTTTCAAGGGGCAAATCTGATAATGGCTGGCTGTACACGCTGCTTGCTATGATCGGAGAACAGTTTGATTGTGGTGATGAAATTTGTGGAGCGGTTGTTAATGTTAGATCTGGGCAGGATAAAATATCGATTTGGACAAAGAATGCTTCCAATGAAGCTGCGCAGGCGAGCATTGGGAAACAGTGGAAGGAGTTTCTTGATTACAATGACAGCATTGGGTTTATATTCCACGAGGATGCAAAGAAATTCGACAGACATGCAAAGAACAAATATTCAGTGTGA 708 44.92 MVVEETIKATSTEDLSNTIANQNPRGRGGDEDEELEEGEIVGDDDLDSSNLSAAIVHQPHPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCFKHKIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHEDAKKFDRHAKNKYSV 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8200077 8203409 + ClCG03G007240.1 Cla03g00677 269177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g00677 235 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-1 2 235 - -
Cla03g00677 235 Pfam Eukaryotic initiation factor 4E 61 213 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cla03g00677 235 MobiDBLite consensus disorder prediction 1 36 - -
Cla03g00677 235 SUPERFAMILY eIF4e-like 56 231 IPR023398 -
Cla03g00677 235 MobiDBLite consensus disorder prediction 9 24 - -
Cla03g00677 235 Gene3D RNA Cap, Translation Initiation Factor Eif4e 51 235 IPR023398 -
Cla03g00677 235 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 2 235 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cla03g00677 235 ProSitePatterns Eukaryotic initiation factor 4E signature. 116 139 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g00677 Cla-Chr3:8200077 Cla06g00693 Cla-Chr6:8835835 5.20E-12 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g00677 K03259 - csv:101206312 452.981