Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g00686 ATGGAAACGAATAACAGTAACAACGGGGTGAGGTTTTTGTTGGGGAAGCAATCGTCGATGGCGCCGGACCGGAAATCGGAGGAGGTGGCGGAGGCGGAGGCGGAGGCGGGGGAAGACGGGGAGGAGATCGATCCAGGGGTGAGATTGATGTATTTGGCGAATGAAGGCGATTTAGAAGGGATTAAGGAGCTTCTAGATTCTGGAATTGATGTCAATTTTCACGATGTTGATAATCGGACGGCGCTTCATGTTGCTGCTTGTCAAGGCTGCTCCAAGATCGTCGATTTATTGCTCCACCGTGGCGCTGAGATTGACCCTAAAGATCGCTGGGGTAGTACGCCTCTTGCAGATGCTATATTCTACAAAAATCATGAAGTTATCAAATTGCTGGAAAAAAGAGGCGCAAAACATCTGATGGCTCCCATGCTTGTCAAGCATGCTCGTGAAGTCCCAGAATATGAAATTGATCCTAAAGAATTTGACTTCACAAACAGTGTCAACTTGACCAAGGGTACCTTCCATCTTGCATCATGGCGCGGAATCCAAGTTGCAGTCAAAGAGCTTCCCGAGGATGTGATTTCAGAGGAGGATAAAGTGAACGCCTTTAGAGATGAGCTTGCATTGCTTCAGAAGATTCGGCATCCTAATGTCGTTCAATTTCTTGGTGCTGTCACTCAAAGTAGTCCCATGATGATTGTTACTGAATATTTGCCTAAGGGAGATCTTTGTCAACTGTTACAGAGAAAAGGAGCATTAAAACCAATTGTAGCTGTGAAATTTGCCCTTGATATTGCAAGGGGAATGAACTATTTACACGAAAATAAACCTGCCCCGATCATCCACCGTGATCTCGAGCCATCAAATATATTGCGAGATGACACTGGGAACCTGAAAGTTGCAGACTTTGGAGTTAGCAAATTGCTCACAGTCAAGGAGGATAAACCTCTAATTTGTCAAGACACTGCTTGCCGATATGTCGCTCCAGAAGTTTTCAAAAACAATGGATACGATACCAAAGTAGATGTCTTCTCCTTTGCTTTAATTCTACAAGAGATGATCGAAGGGCAACCACCGTTTTCAAACAAAAAAGAAAATGCCATTCTTAAAGAGTATGCAGCCGGAGTACGCCCTCCTTTCAAAGCTCCAGCTAAATGCTACGCCCATGGAATTAAAGAGTTGATTGAAGATTGCTGGGATGAGAAGCCATCAAAGAGACCAACTTTTAGGCAGATAATCACGAGGCTGGAAACAATTCATCACAGTCTTAGCCATAGAAGGCGTTGGAAGCTCCCAACAATGAGATGTTTTCAGGATCCAGAAGCTAAGATAAGAAGAGACCATCTCTCAAGCAGCCGGAGCCTTTCATCACGATCTGCAAGCAGCATATGA 1389 44.71 METNNSNNGVRFLLGKQSSMAPDRKSEEVAEAEAEAGEDGEEIDPGVRLMYLANEGDLEGIKELLDSGIDVNFHDVDNRTALHVAACQGCSKIVDLLLHRGAEIDPKDRWGSTPLADAIFYKNHEVIKLLEKRGAKHLMAPMLVKHAREVPEYEIDPKEFDFTNSVNLTKGTFHLASWRGIQVAVKELPEDVISEEDKVNAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLCQLLQRKGALKPIVAVKFALDIARGMNYLHENKPAPIIHRDLEPSNILRDDTGNLKVADFGVSKLLTVKEDKPLICQDTACRYVAPEVFKNNGYDTKVDVFSFALILQEMIEGQPPFSNKKENAILKEYAAGVRPPFKAPAKCYAHGIKELIEDCWDEKPSKRPTFRQIITRLETIHHSLSHRRRWKLPTMRCFQDPEAKIRRDHLSSSRSLSSRSASSI 462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8320961 8326267 - ClCG03G007320.2 Cla03g00686 269186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g00686 462 ProSiteProfiles Protein kinase domain profile. 127 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla03g00686 462 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 12 445 - -
Cla03g00686 462 Gene3D Phosphorylase Kinase; domain 1 161 237 - -
Cla03g00686 462 MobiDBLite consensus disorder prediction 1 40 - -
Cla03g00686 462 PIRSF ILK 1 437 - -
Cla03g00686 462 SUPERFAMILY Ankyrin repeat 48 137 IPR036770 -
Cla03g00686 462 ProSiteProfiles Ankyrin repeat region circular profile. 77 109 - -
Cla03g00686 462 SMART ANK_2a 77 106 IPR002110 GO:0005515
Cla03g00686 462 SMART ANK_2a 110 139 IPR002110 GO:0005515
Cla03g00686 462 SMART ANK_2a 44 73 IPR002110 GO:0005515
Cla03g00686 462 Pfam Ankyrin repeats (3 copies) 49 136 IPR002110 GO:0005515
Cla03g00686 462 SUPERFAMILY Protein kinase-like (PK-like) 171 418 IPR011009 -
Cla03g00686 462 Pfam Protein tyrosine and serine/threonine kinase 171 415 IPR001245 GO:0004672|GO:0006468
Cla03g00686 462 ProSiteProfiles Ankyrin repeat profile. 77 109 IPR002110 GO:0005515
Cla03g00686 462 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 12 445 - -
Cla03g00686 462 CDD STKc_MAP3K-like 171 415 - -
Cla03g00686 462 Gene3D Transferase(Phosphotransferase) domain 1 238 453 - -
Cla03g00686 462 Gene3D - 15 150 IPR036770 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla01g02349 Cla03g00686 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g00686 Cla-Chr3:8320961 Cla09g01326 Cla-Chr9:21182462 1.43E-140 dispersed
Cla02g02210 Cla-Chr2:37254735 Cla03g00686 Cla-Chr3:8320961 2.80E-13 transposed
Cla01g02349 Cla-Chr1:37242729 Cla03g00686 Cla-Chr3:8320961 0 wgd
Cla02g01792 Cla-Chr2:32948878 Cla03g00686 Cla-Chr3:8320961 3.49E-51 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80429 PF07714 PK_Tyr_Ser-Thr 3.00E-55 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g00686 - - csv:101205123 843.573