Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla03g00693 | ATGGACATAAACTTTGTTCCACTATGCACCATTTTACTGTCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGGCTTATCCACCGATCTTCATACACTGCGCTCCCAACAACAAACCTCCGATTCACAGCTCCTTAAGTATGACTTCGGGTTCCAGAATGCCCACTTGGAAGGAGAGGGAAAACAACAAGCGTCGTGAGAGGCGCCGTCGTGCAATCGCCGCTAAGATCTTTCTCGGCTTGCGAATGTACGGCAACTACAAGCTCCCCAAGCATTGCGACAATAATGAGGTCCTCAAAGCCCTCTGTGATGAAGCTGGATGGACTGTCGAAGAAGACGGCACTACCTATCGGAAGGGATGCAAACCTGTGGAACGCGATATCATGGGTGGATCAGCTTCTGCGAGTCCATGTTCATCTTACCAGCCAAGCCCACGGGCATCTTATAACCCAAGTCCTGCATCTTCTTCCTTCCCAAGCCCCACATCTTCCCGTTATGCCATTAATGGCAATGACAATGCTACCGATCCCAATTCCCTCATCCCATGGCTGAAGAACCTTTCCTCAGGCTCATCATCAGCTTCCTCCAGGCTGCCTCACCATCTTTTTATTACTTGTGGCTCCATAAGTGCGCCTGTCACCCCTCCATCGAGCTCCCCAACTGCACGAACACCCAGAAAACCAAATGATTGGGACAATCATCCAGCAGTTGCTCCTGCTTGGGCTGCACAGCGCTTCTCATGTTTGCCTGCGTCGACCCCACCGAGCCCTGGGCGTCAGGTGTTGGCTGATCCAGCATGGCTTGATAGTATGCGGATTCCTCAAAGTGGACCATCATCTCCAACCTTCAGCCTTGTGGCAAGGAATCCATTCGGATTTAAGGAGGCAATGTCTGCCGGAGGGTCTCGTAATTGGACTCCTGCACAAAGCGGGACGTGCTCACCCACAGTTGCTGCAGGCACTGATCATACTATAGATGTTCCTATGATGGATGGAACTGCAGCGGAGTTTGCCTTCGGAAGTTGTTCCGTTGGGATAGTGAAGCCTTGGGAAGGAGAGAGAATTCATGAGGAATGCATCTCTGATGATCTCGAACTCACACTTGGAAATTCAAGCACTAGGTGA | 1128 | 50.53 | MDINFVPLCTILLSSSSSSSSSSSSSAYPPIFIHCAPNNKPPIHSSLSMTSGSRMPTWKERENNKRRERRRRAIAAKIFLGLRMYGNYKLPKHCDNNEVLKALCDEAGWTVEEDGTTYRKGCKPVERDIMGGSASASPCSSYQPSPRASYNPSPASSSFPSPTSSRYAINGNDNATDPNSLIPWLKNLSSGSSSASSRLPHHLFITCGSISAPVTPPSSSPTARTPRKPNDWDNHPAVAPAWAAQRFSCLPASTPPSPGRQVLADPAWLDSMRIPQSGPSSPTFSLVARNPFGFKEAMSAGGSRNWTPAQSGTCSPTVAAGTDHTIDVPMMDGTAAEFAFGSCSVGIVKPWEGERIHEECISDDLELTLGNSSTR | 375 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 8378055 | 8381365 | - | ClCG03G007390.2 | Cla03g00693 | 269193 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla03g00693 | 375 | MobiDBLite | consensus disorder prediction | 134 | 172 | - | - | |
Cla03g00693 | 375 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 4 | 42 | 375 | - | - | |
Cla03g00693 | 375 | MobiDBLite | consensus disorder prediction | 47 | 70 | - | - | |
Cla03g00693 | 375 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 3-RELATED | 42 | 375 | IPR033264 | GO:0003700|GO:0006351|GO:0009742 | |
Cla03g00693 | 375 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 52 | 189 | IPR008540 | - | |
Cla03g00693 | 375 | MobiDBLite | consensus disorder prediction | 213 | 232 | - | - | |
Cla03g00693 | 375 | MobiDBLite | consensus disorder prediction | 132 | 172 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g01882 | Cla-Chr1:33622507 | Cla03g00693 | Cla-Chr3:8378055 | 1.22E-39 | dispersed | |
Cla03g00693 | Cla-Chr3:8378055 | Cla07g00969 | Cla-Chr7:25883743 | 8.83E-116 | dispersed | |
Cla03g00693 | Cla-Chr3:8378055 | Cla08g01510 | Cla-Chr8:27895970 | 2.83E-42 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
60806 | PF05687 | BES1_N | 3.90E-66 | No_clan | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla03g00693 | - | - | csv:101204637 | 563.148 |