Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g00693 ATGGACATAAACTTTGTTCCACTATGCACCATTTTACTGTCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGGCTTATCCACCGATCTTCATACACTGCGCTCCCAACAACAAACCTCCGATTCACAGCTCCTTAAGTATGACTTCGGGTTCCAGAATGCCCACTTGGAAGGAGAGGGAAAACAACAAGCGTCGTGAGAGGCGCCGTCGTGCAATCGCCGCTAAGATCTTTCTCGGCTTGCGAATGTACGGCAACTACAAGCTCCCCAAGCATTGCGACAATAATGAGGTCCTCAAAGCCCTCTGTGATGAAGCTGGATGGACTGTCGAAGAAGACGGCACTACCTATCGGAAGGGATGCAAACCTGTGGAACGCGATATCATGGGTGGATCAGCTTCTGCGAGTCCATGTTCATCTTACCAGCCAAGCCCACGGGCATCTTATAACCCAAGTCCTGCATCTTCTTCCTTCCCAAGCCCCACATCTTCCCGTTATGCCATTAATGGCAATGACAATGCTACCGATCCCAATTCCCTCATCCCATGGCTGAAGAACCTTTCCTCAGGCTCATCATCAGCTTCCTCCAGGCTGCCTCACCATCTTTTTATTACTTGTGGCTCCATAAGTGCGCCTGTCACCCCTCCATCGAGCTCCCCAACTGCACGAACACCCAGAAAACCAAATGATTGGGACAATCATCCAGCAGTTGCTCCTGCTTGGGCTGCACAGCGCTTCTCATGTTTGCCTGCGTCGACCCCACCGAGCCCTGGGCGTCAGGTGTTGGCTGATCCAGCATGGCTTGATAGTATGCGGATTCCTCAAAGTGGACCATCATCTCCAACCTTCAGCCTTGTGGCAAGGAATCCATTCGGATTTAAGGAGGCAATGTCTGCCGGAGGGTCTCGTAATTGGACTCCTGCACAAAGCGGGACGTGCTCACCCACAGTTGCTGCAGGCACTGATCATACTATAGATGTTCCTATGATGGATGGAACTGCAGCGGAGTTTGCCTTCGGAAGTTGTTCCGTTGGGATAGTGAAGCCTTGGGAAGGAGAGAGAATTCATGAGGAATGCATCTCTGATGATCTCGAACTCACACTTGGAAATTCAAGCACTAGGTGA 1128 50.53 MDINFVPLCTILLSSSSSSSSSSSSSAYPPIFIHCAPNNKPPIHSSLSMTSGSRMPTWKERENNKRRERRRRAIAAKIFLGLRMYGNYKLPKHCDNNEVLKALCDEAGWTVEEDGTTYRKGCKPVERDIMGGSASASPCSSYQPSPRASYNPSPASSSFPSPTSSRYAINGNDNATDPNSLIPWLKNLSSGSSSASSRLPHHLFITCGSISAPVTPPSSSPTARTPRKPNDWDNHPAVAPAWAAQRFSCLPASTPPSPGRQVLADPAWLDSMRIPQSGPSSPTFSLVARNPFGFKEAMSAGGSRNWTPAQSGTCSPTVAAGTDHTIDVPMMDGTAAEFAFGSCSVGIVKPWEGERIHEECISDDLELTLGNSSTR 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8378055 8381365 - ClCG03G007390.2 Cla03g00693 269193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g00693 375 MobiDBLite consensus disorder prediction 134 172 - -
Cla03g00693 375 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 42 375 - -
Cla03g00693 375 MobiDBLite consensus disorder prediction 47 70 - -
Cla03g00693 375 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 42 375 IPR033264 GO:0003700|GO:0006351|GO:0009742
Cla03g00693 375 Pfam BES1/BZR1 plant transcription factor, N-terminal 52 189 IPR008540 -
Cla03g00693 375 MobiDBLite consensus disorder prediction 213 232 - -
Cla03g00693 375 MobiDBLite consensus disorder prediction 132 172 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01882 Cla-Chr1:33622507 Cla03g00693 Cla-Chr3:8378055 1.22E-39 dispersed
Cla03g00693 Cla-Chr3:8378055 Cla07g00969 Cla-Chr7:25883743 8.83E-116 dispersed
Cla03g00693 Cla-Chr3:8378055 Cla08g01510 Cla-Chr8:27895970 2.83E-42 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
60806 PF05687 BES1_N 3.90E-66 No_clan Cla TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g00693 - - csv:101204637 563.148