Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla03g00699 | ATGGATGATAATGTTACCTTCAACAATAATAACCACCAATTCTTTTCGGCTGATCAACTTGAAGATTCCGACGAATCAAAACCCGCCCCTGATTCTCCTCCTCCTAATTCCGCCGCCGCCGCCACCGCCACCAAGAAGGGCAGAAGAGGGATGAAGAAGAAAGTTCTGTCGGTGAAAATTAATGGCGACAACCCAAGAAATTCCTCTGGTTCTACAACTCCACCTTCTGATGCTTGGGCCTGGAGAAAGTACGGTCAAAAGCCCATCAAAGGCTCTCCTTATCCCAGGGCGTATTATAGGTGTAGTAGTTCAAAGGGATGTCCAGCGAGGAAGCAAGTAGAGAGGAATCGGCTTGATCCAACTATGTTGCTCATTACATATTCGTGTGAGCATAATCATTCCGGTCCGGTTTCTAGGAACAACAATTCCAACCACAACCAAACCGATGCGGTGAAACCCGATTCACCGGAGACGGTTCCGGTTGAAGTAGAAGAGAAATTTGTGGAGATAGTGGGAGAGGAGTCGTTGATAACGGGAGATGAGTTTAGTTGGTTTGGAGAAATGGAAACGACGTCGTCTACAGTGCTTGAAAGCTCCATTTTTTCGGGGAGAGCATCCAGTGGATTGGTGGATCATTCAATTTCAAGTGACGTGGCAATGCTTTTGCCCATGGGGGATGATGACATGGACGAATCACTCTTTGCGGATCTCGGCGAGTTGCCGGAATGTTCTCTGGTGTTCCGGCGTGGCGGAGGTCGGGGATTACCGGTGGATGAACAACCGGCTGCTGCCCAGCGGCGGATCACACCGTGGTGTGGAACCACCACATGA | 831 | 49.58 | MDDNVTFNNNNHQFFSADQLEDSDESKPAPDSPPPNSAAAATATKKGRRGMKKKVLSVKINGDNPRNSSGSTTPPSDAWAWRKYGQKPIKGSPYPRAYYRCSSSKGCPARKQVERNRLDPTMLLITYSCEHNHSGPVSRNNNSNHNQTDAVKPDSPETVPVEVEEKFVEIVGEESLITGDEFSWFGEMETTSSTVLESSIFSGRASSGLVDHSISSDVAMLLPMGDDDMDESLFADLGELPECSLVFRRGGGRGLPVDEQPAAAQRRITPWCGTTT | 276 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 8466093 | 8467094 | - | ClCG03G007470.1 | Cla03g00699 | 269199 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla03g00699 | 276 | SMART | WRKY_cls | 75 | 135 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla03g00699 | 276 | MobiDBLite | consensus disorder prediction | 134 | 160 | - | - | |
Cla03g00699 | 276 | MobiDBLite | consensus disorder prediction | 1 | 79 | - | - | |
Cla03g00699 | 276 | SUPERFAMILY | WRKY DNA-binding domain | 72 | 135 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cla03g00699 | 276 | PANTHER | OS01G0750100 PROTEIN | 19 | 274 | - | - | |
Cla03g00699 | 276 | MobiDBLite | consensus disorder prediction | 134 | 153 | - | - | |
Cla03g00699 | 276 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 19 | 274 | IPR044810 | GO:0003700 | |
Cla03g00699 | 276 | MobiDBLite | consensus disorder prediction | 61 | 76 | - | - | |
Cla03g00699 | 276 | Pfam | WRKY DNA -binding domain | 77 | 133 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla03g00699 | 276 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Cla03g00699 | 276 | Gene3D | WRKY domain | 63 | 137 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cla03g00699 | 276 | ProSiteProfiles | WRKY domain profile. | 76 | 136 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla03g00699 | Cla-Chr3:8466093 | Cla03g00810 | Cla-Chr3:10213606 | 9.02E-35 | dispersed | |
Cla03g00699 | Cla-Chr3:8466093 | Cla07g00246 | Cla-Chr7:2705874 | 2.35E-48 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
60808 | PF03106 | WRKY | 6.90E-25 | CL0274 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla03g00699 | - | - | csv:101203902 | 448.358 |