Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g00713 ATGGAGAAAAAGGGTACCATTTTAATGCAAAGGTACGAGCTTGGGAGAATGCTTGGACAAGGCACTTTTGCTAAAGTCTACCATGCTCGTAATCTCAACTCTGGCCAGAGCGTGGCCATTAAAATCATTGACAAAGAGAAAGTGTTACGTGTTGGGTTGATCGACCAAATCAAGAGGGAAATCTCTGTTATGCGCCTTGTCCGACATCCCAATGTGGTGCAGCTTTATGAGGTTATGGCTAGCAGGACCAAAATCTATTTTGCTATGGAGTATGTTAAAGGAGGGGAGCTTTTTAATAAAGTGGCTAAAGGGAAGCTTAAAGAAGATGCTGCTCGTAAGTACTTTCAACAGCTAATTGGTGCTGTTGATTATTGTCATAGCCGTGGTGTGTACCATAGAGATATCAAGCCTGAAAATCTCCTTCTTGATGAGTTTGGGAATCTCAAGATTTCTGATTTTGGGTTAAGTGCTTTGGCCGAGTCTAGAAGACAAGATGGGCTTCTTCATACAACTTGTGGTACTCCTGCTTATGTTGCCCCTGAAGTCATCAACAAGAAAGGTTTGAATTTTGATTGCTTTGTTTATTTTGCATTGAGATTATTGACTTTGAAATCATTGATTTGTATATGGTACGAGATATTGATGAATTTGCATTGGCAATTACTTGTTAAAAAAGGTTATGATGGTGCTAAAGCTGATATTTGGTCATCTGGGGTTGTTCTGTTTGTTCTTCTGGCTGGTTATCTCCCTTTCCATGATCCAAATCTAATGGAAATGTACAGAAAAATCTCAAGAGGAGAATTCAGATGCCCTCATTGGTTTCCCCCAGAAGTTCGAAAACTACTCTCAAGAATCCTTGACCCATATCCTCACACTAGAATAAACATGGCCAAACTCATGGAAAATTCCTGGTTCAAGAAGGGTTTCAAAACAAATGTAGCAACTCCAAAACAACTTCAAATCAATGGCGATGTGTCGTATGTGAGCGATGTTCATTCCGCTTTCGACGACATTAGTTGGGATGAAGGAAGCTCTGTTAGTAACACCAGTGATAGTGGAAAGCCACCAACAGCTAAAGCCCCAATGAGACATAATTCCTTCAATGCATTTGACATCATATCTCTCTCACCAGGTTTTGATCTCTCAGGTTTGTTTGAGAGTGATGCGAATGAGAGGCCACAGTCTCGTTTCACGACCACGAAACCTGCATCCGCGATCGTGTCGAAGTTTGAGGAAATAGCAGAAATGGAAAGGTTCAAAGTGATGAAGAAAGATGGGATTGTTAAACTGCAGGGGAGTAAACAGGGGAGGAAAGGACAATTGGCTATAGATGCTGAAATATTTGAAGTAACACCTTCATTTTTTGTGGTGGAAGTGAAGAAAACTGCTGGAGACACATTGGAATATAGGCAATTTTACAACAAAGACATGAGACCTTGTCTTAAGGATATTGTATGGACTTGGGAAGGAAATGAGCAGCAGCAACAACAACAACCACAATCACAAATTGTTTAG 1515 40.59 MEKKGTILMQRYELGRMLGQGTFAKVYHARNLNSGQSVAIKIIDKEKVLRVGLIDQIKREISVMRLVRHPNVVQLYEVMASRTKIYFAMEYVKGGELFNKVAKGKLKEDAARKYFQQLIGAVDYCHSRGVYHRDIKPENLLLDEFGNLKISDFGLSALAESRRQDGLLHTTCGTPAYVAPEVINKKGLNFDCFVYFALRLLTLKSLICIWYEILMNLHWQLLVKKGYDGAKADIWSSGVVLFVLLAGYLPFHDPNLMEMYRKISRGEFRCPHWFPPEVRKLLSRILDPYPHTRINMAKLMENSWFKKGFKTNVATPKQLQINGDVSYVSDVHSAFDDISWDEGSSVSNTSDSGKPPTAKAPMRHNSFNAFDIISLSPGFDLSGLFESDANERPQSRFTTTKPASAIVSKFEEIAEMERFKVMKKDGIVKLQGSKQGRKGQLAIDAEIFEVTPSFFVVEVKKTAGDTLEYRQFYNKDMRPCLKDIVWTWEGNEQQQQQQPQSQIV 504
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8613905 8615419 - ClCG03G007600.1 Cla03g00713 269213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g00713 504 Pfam Protein kinase domain 12 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla03g00713 504 Pfam Protein kinase domain 223 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla03g00713 504 ProSiteProfiles NAF domain profile. 362 386 IPR018451 GO:0007165
Cla03g00713 504 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 20 221 498 - -
Cla03g00713 504 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 20 2 188 - -
Cla03g00713 504 CDD CIPK_C 368 482 - -
Cla03g00713 504 SUPERFAMILY Protein kinase-like (PK-like) 8 356 IPR011009 -
Cla03g00713 504 Gene3D Kinase associated domain 1, KA1 362 487 - -
Cla03g00713 504 Gene3D Transferase(Phosphotransferase) domain 1 3 215 - -
Cla03g00713 504 Gene3D Transferase(Phosphotransferase) domain 1 216 351 - -
Cla03g00713 504 MobiDBLite consensus disorder prediction 342 362 - -
Cla03g00713 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Cla03g00713 504 PANTHER - 221 498 - -
Cla03g00713 504 Pfam NAF domain 365 423 IPR004041 GO:0007165
Cla03g00713 504 ProSiteProfiles Protein kinase domain profile. 12 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla03g00713 504 PANTHER - 2 188 - -
Cla03g00713 504 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Cla03g00713 504 SMART serkin_6 12 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla01g02325 Cla03g00713 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01676 Cla-Chr2:31599010 Cla03g00713 Cla-Chr3:8613905 0 dispersed
Cla03g00713 Cla-Chr3:8613905 Cla04g00656 Cla-Chr4:21159123 0 dispersed
Cla01g02325 Cla-Chr1:37043416 Cla03g00713 Cla-Chr3:8613905 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80434 PF00069 Pkinase 1.80E-55 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g00713 K07198 - csv:101206082 820.076