Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla03g00724 | ATGGTGATGGGAGAGAGAAAGAATAATAATGAAGATCAATACGAAGGTGGAATTAAGCTGTTTGGGGCAACAATTATGTTGCAAAATAACAGGCAAATCAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGCCAATAAATCAGATCAGCAATCACTAGAAAAAAGGCCTGAGAAGATCATCCCTTGCCCAAGATGCAAAAGCATGGACACCAAATTTTGTTACTTCAATAATTACAATGTTAATCAGCCAAGGCATTTCTGTAAGGGCTGCCAAAGGTATTGGACTGCCGGCGGGGCCCTTCGCAACGTCCCCGTCGGAGCCGGCCGTCGCAAAACCAAGCCCCCTTGTCGGACCTTCGCTGGCTTGCCGGAAAATTGTGTCTTTGATTCTTCAGGGATCGTTGCGGTTCAACCGTTTGAGTTGGAAGGGATGGTCGAGGAGTGGCATGTCGTCGCTGCCACCGCCACACAAGGCGGTTTTCGACAAATTTTACCGGTAAAGCGGCGGAGGGATTGCCAAGATGGCCAAACTTGTTGA | 540 | 47.41 | MVMGERKNNNEDQYEGGIKLFGATIMLQNNRQIKEEEEEEEEEEANKSDQQSLEKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPCRTFAGLPENCVFDSSGIVAVQPFELEGMVEEWHVVAATATQGGFRQILPVKRRRDCQDGQTC | 179 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 8848676 | 8849215 | + | ClCG03G007720.1 | Cla03g00724 | 269224 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla03g00724 | 179 | MobiDBLite | consensus disorder prediction | 30 | 56 | - | - | |
Cla03g00724 | 179 | ProSitePatterns | Zinc finger Dof-type signature. | 63 | 99 | IPR003851 | GO:0003677|GO:0006355 | |
Cla03g00724 | 179 | PANTHER | CYCLIC DOF FACTOR 2 | 14 | 172 | IPR045174 | GO:0003700|GO:0006355 | |
Cla03g00724 | 179 | Coils | Coil | 23 | 54 | - | - | |
Cla03g00724 | 179 | Pfam | Dof domain, zinc finger | 59 | 114 | IPR003851 | GO:0003677|GO:0006355 | |
Cla03g00724 | 179 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.5-LIKE | 14 | 172 | - | - | |
Cla03g00724 | 179 | ProSiteProfiles | Zinc finger Dof-type profile. | 61 | 115 | IPR003851 | GO:0003677|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla01g02318 | Cla03g00724 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla03g00724 | Cla-Chr3:8848676 | Cla10g01519 | Cla-Chr10:30481283 | 3.53E-37 | dispersed | |
Cla01g02318 | Cla-Chr1:36975364 | Cla03g00724 | Cla-Chr3:8848676 | 2.15E-54 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
60810 | PF02701 | zf-Dof | 6.20E-32 | No_clan | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla03g00724 | - | - | csv:101204978 | 334.724 |