Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g00768 ATGGATGAAGATGCTAATTCTTGGTTAAGAAGAACCAAGTTTTCTCACACAATATGTTATCGTTTAGAGTCCTTACGATTGGCTTCCTTTCCTGTGGTCACTCAGCCACCACTCAAATCAGTCGCACAATCAAGATCAACCCTTCCTAATAACCTAACCAAGCAGAGGTCTTTATCTCCTCCTCCACAAACTACACTCTCCGGCGCATTTAAGGATGCACGTACCGATCAAAAACGATTTTCAACTCCACAGCCTCAGAGGAAAGAACATGTAAAAGAAAAGGGTAAAAGGCTATTTAGTAAAAAAGCTAAGGTGCAAAATTCCCTGAAGGAAGAGAAGTTAAAAGGACCTTTGAGGCATCTTATATCTTTTAAAGGCAATGATAAGTTCAAATTCAAGGAGTCTTCTTGGACTAAGTTTGGCGGAGGGAAGGTCACTGCTGTTGAAGCTGAAGACGAATCGTCTATTGACCTGTCTAAGTTGATGTTTGGACATAGATTTGCTTTTGGAGCTCATAGTCGGCTATACCATGGAATTTATGAAGATAAAGTTGTTGCTGCTAAGATGATCAATCTACCAGTCCATGACGAAAATGGCGATCTCGCAGCTCGCTTAATAAAGCAATTTGGTAGGGAAGTAACCCTTTTGTCTCGTCTCCATCATCGCAATGTTATAAAGTTAGTAGCAGCAGTGAAAAAGCCACCCGTTTATTGCATCATCACTGAGTATCTACCTCAGGGTTCCTTGAGGGCATATCTTCACAAACTTGAAAAAAAATCTCTCCCATTGCAAAAACAAATTGCCATTGCCTTAGACATTGCTCGTGGGATGGAATACATTCACTCGCAAGGCGTCATTCATCGGGATCTCAAACCTGAGAACATTCTTATTGATCAAGACTTTTGTCTAAAGATTGCCGATTTTGGCATTGCTTGTGAGGAGGCACATTGTGATACACTGGCCGAGGACCCCGGAACTTTTCGTTGGATGGCCCCCGAGATGATCAAACGGAAACCTTACAGGAGAAAGGTCGATATCTACAGCTTCGGACTTCTCCTATGGGAATTGGTAGCTGGAAAAATCCCTTATGAGGATATGACTCCAATCCAAGCAGCTTTTGCAGTTGTAGATAAGAATATTAGACCGGTCATCCCGGGGGAGTGTCCTCCAGTGATGCAGATGTTAATCGAGCAATGTTGGTGCGAGAAACCGGAGAAGAGGCCGGAGTTTTGGCAGGTGGTGAAAGTGTTAGAGCAACTTGAGAGTTGTGTTGGGGAAGATGGTACATTGATGACGAATGTAGAGGTAGAGTTAGAGGGGAAGCCAAGTTGGGAAGATCACAAGAAAGGTTTAAAGCATTGGATACAGAAGTTTGGTCCTCTTCATTCTCATACTTCTCTCACCTCCAAATCTAAATTCATATGA 1425 42.67 MDEDANSWLRRTKFSHTICYRLESLRLASFPVVTQPPLKSVAQSRSTLPNNLTKQRSLSPPPQTTLSGAFKDARTDQKRFSTPQPQRKEHVKEKGKRLFSKKAKVQNSLKEEKLKGPLRHLISFKGNDKFKFKESSWTKFGGGKVTAVEAEDESSIDLSKLMFGHRFAFGAHSRLYHGIYEDKVVAAKMINLPVHDENGDLAARLIKQFGREVTLLSRLHHRNVIKLVAAVKKPPVYCIITEYLPQGSLRAYLHKLEKKSLPLQKQIAIALDIARGMEYIHSQGVIHRDLKPENILIDQDFCLKIADFGIACEEAHCDTLAEDPGTFRWMAPEMIKRKPYRRKVDIYSFGLLLWELVAGKIPYEDMTPIQAAFAVVDKNIRPVIPGECPPVMQMLIEQCWCEKPEKRPEFWQVVKVLEQLESCVGEDGTLMTNVEVELEGKPSWEDHKKGLKHWIQKFGPLHSHTSLTSKSKFI 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9323890 9326782 + ClCG03G008190.1 Cla03g00768 269268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g00768 474 PRINTS Tyrosine kinase catalytic domain signature 241 254 IPR001245 GO:0004672|GO:0006468
Cla03g00768 474 PRINTS Tyrosine kinase catalytic domain signature 279 297 IPR001245 GO:0004672|GO:0006468
Cla03g00768 474 PRINTS Tyrosine kinase catalytic domain signature 325 335 IPR001245 GO:0004672|GO:0006468
Cla03g00768 474 PRINTS Tyrosine kinase catalytic domain signature 344 366 IPR001245 GO:0004672|GO:0006468
Cla03g00768 474 PRINTS Tyrosine kinase catalytic domain signature 388 410 IPR001245 GO:0004672|GO:0006468
Cla03g00768 474 SUPERFAMILY Protein kinase-like (PK-like) 153 417 IPR011009 -
Cla03g00768 474 Gene3D Transferase(Phosphotransferase) domain 1 245 452 - -
Cla03g00768 474 MobiDBLite consensus disorder prediction 39 98 - -
Cla03g00768 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Cla03g00768 474 MobiDBLite consensus disorder prediction 72 93 - -
Cla03g00768 474 ProSiteProfiles Protein kinase domain profile. 161 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla03g00768 474 Gene3D Phosphorylase Kinase; domain 1 150 244 - -
Cla03g00768 474 MobiDBLite consensus disorder prediction 39 71 - -
Cla03g00768 474 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 3 443 - -
Cla03g00768 474 PANTHER TYROSINE KINASE FAMILY PROTEIN 3 443 - -
Cla03g00768 474 SMART serkin_6 161 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla03g00768 474 Pfam Protein tyrosine and serine/threonine kinase 164 417 IPR001245 GO:0004672|GO:0006468
Cla03g00768 474 CDD STKc_MAP3K-like 168 417 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g00768 Cla-Chr3:9323890 Cla11g01089 Cla-Chr11:22239628 2.32E-83 dispersed
Cla01g02251 Cla-Chr1:36458051 Cla03g00768 Cla-Chr3:9323890 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80437 PF07714 PK_Tyr_Ser-Thr 9.70E-60 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g00768 - - csv:101222817 835.484