Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g00847 AGACAAATAACAGAGAGCTCACACTGTTCTCCCAAACACTTCAAAACAAAACACACCCACATGGGTTCTTTGCCTTCCGAAGCTTTGGCCGTCGAAATTACCGACACCCATATTCATACCGTCGCCGGTGCCGGCGCAGAAACCTCTGAATGGCTTCTCAATTCCCCCAACCCTCCAACTTTGTGGGAAGAAATTGTGGACGCCATCAAAGGAAATGCAGTTCCTCGAAGTTGCACAAAGAACCCCAACAAAAACACTTCTTCTTCTTCAAGCTCTGGAAAACAGAGCATTTTCAAAACGATACTTTCCCTTCTGCAGAGAGTGTTCCCGATCCTTAAATTGCCTCGAAATTACAAAGCCTCCAAGTTCAAAAACGACCTCATGGCTGGTTTAACACTCGCCAGTCTCAGCATCCCTCAGAGTATTGGGTATGCTAACTTGGCAAAGCTTGATCCTCAGTTCGGTCTCTATACAAGTGTTGTTCCTCCTTTGATTTATGCATTTATGGGGAGTTCGAGAGAGATAGCGATTGGACCGGTGGCTGTGGTTTCATTGCTTCTTTCGTCTATGCTTCAAGAAATTCAAGATCCTGTTGCAGACTCAGTTGCTTATAGAAGGCTTGTTTTCACTGTAACTTTATTTGCAGGGATTTTCCAAGCATCATTTGGACTCTTGAGACTGGGTTTTCTTGTGGACTTCCTATCTCATGCTGCCATTGTTGGGTTCATGGCTGGGGCTGCCATTCTCATTGGTCTTCAACAAATGAAAGGCTTACTTGCCATCAGCAACTTCACCGCTAAAACTGATGTGGTTTCTGTTTTGGAGTCTGTGGTGAAATCTGTTCACCAGACTTGGTACCCTTTGAACATTGTACTTGGCTGCTCCTTCCTAATCTTTCTCCTTGTAGCCAGGTTCATAGGCAGAAGGAAGAAGAAGCTATTTTGGGTGTCAGCCATTGCTCCTCTCATATCAGTTATTCTCTCCACTTTGATAGTGTTTGTTTCAAGAGCTGACAAACATGGAGTTAAGATAGTGAAGGAAGTGAAAAAAGGACTGAACCCAATCTCCATTCATCAGCTTCAATTGAACAGCTCAACTGTTGGGTTAGCTGCAAAAGCTGGCCTCATTGCTGCTCTTATAGCTCTCACAGAAGCCATCGCGGTGGGCCGATCGTTCGCCTCGATTAAAGGCTACAGCATTGATGGGAACAAGGAGATGATAGCCATGGGATTGATGAACATAATAGGCTCTTTAACATCTTGTTACATAGCGACTGGGTCATTCTCAAGAACTGCTGTGAATTATAGTGCTGGGTGTGAAAGTGTATTGTCAAATATAGTGATGGCAATAACAGTGATGGTGACACTGCAATTTATGACTCGGTTTCTTTACTTTACTCCAATGGCCATTTTGGCTTCAATCATTCTCTCAGCTCTTCCTGGTCTCATTGACATTAATGAAGCTTTGCATATTTGGAAGGTTGATAAGCTTGACTTTCTTGCCTGTCTTGGCGCTTTCCTTGGTGTCTTGTTTCATTCGGTCGAATTTGGCCTTCTTGTAGCGGTTGGAATTTCATTTGCAAAAATATTGTTGATTTCAGTAAGACCAGCCACAGAAGAGGTGGGAAGGCTTCCAAGAAGTGAGATGTTTTGCAACATGAAGCAATTCCCCATGGCCACCAAAACTCAAGGACTCTCCATTATCAGAATTAACTCTGCCTTGCTTTGTTTTGCCAATGCTAGTTTCATTAGAGACAGGATAATGAGATTGGTGGAAGATGATAATGATGATGATATTGAAGAAAAAACAGCAAAAGATCAACCTAAACAAGTAGTTGTTGACATGTGCAATGTTTTGAATATCGATACATCAGGAATCATTGCTTTAGAGGAACTTCACAAAAGGTTGTTGTTGCACGGCATTCAACTAACAATAGCCAGTCCAAAATGGGAAGTGATCCACAAACTAAAAAAGACAAACTTTGTTGAAAGAATTGAAGGAAGGGTTTTCCTATCAGTTGGTGAAGCTGTGGATTCCTGCCTTGGAAATGCTTCCAAATTGCCTTATCCCTTACCAAAGTCATTGTGA 2088 42.58 RQITESSHCSPKHFKTKHTHMGSLPSEALAVEITDTHIHTVAGAGAETSEWLLNSPNPPTLWEEIVDAIKGNAVPRSCTKNPNKNTSSSSSSGKQSIFKTILSLLQRVFPILKLPRNYKASKFKNDLMAGLTLASLSIPQSIGYANLAKLDPQFGLYTSVVPPLIYAFMGSSREIAIGPVAVVSLLLSSMLQEIQDPVADSVAYRRLVFTVTLFAGIFQASFGLLRLGFLVDFLSHAAIVGFMAGAAILIGLQQMKGLLAISNFTAKTDVVSVLESVVKSVHQTWYPLNIVLGCSFLIFLLVARFIGRRKKKLFWVSAIAPLISVILSTLIVFVSRADKHGVKIVKEVKKGLNPISIHQLQLNSSTVGLAAKAGLIAALIALTEAIAVGRSFASIKGYSIDGNKEMIAMGLMNIIGSLTSCYIATGSFSRTAVNYSAGCESVLSNIVMAITVMVTLQFMTRFLYFTPMAILASIILSALPGLIDINEALHIWKVDKLDFLACLGAFLGVLFHSVEFGLLVAVGISFAKILLISVRPATEEVGRLPRSEMFCNMKQFPMATKTQGLSIIRINSALLCFANASFIRDRIMRLVEDDNDDDIEEKTAKDQPKQVVVDMCNVLNIDTSGIIALEELHKRLLLHGIQLTIASPKWEVIHKLKKTNFVERIEGRVFLSVGEAVDSCLGNASKLPYPLPKSL 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 11307918 11314160 - ClCG03G008960.1 Cla03g00847 269347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g00847 695 CDD STAS_SulP_like_sulfate_transporter 556 671 - -
Cla03g00847 695 SUPERFAMILY SpoIIaa-like 562 680 IPR036513 -
Cla03g00847 695 Pfam Sulfate permease family 123 503 IPR011547 GO:0016021
Cla03g00847 695 ProSitePatterns SLC26A transporters signature. 152 173 IPR018045 GO:0008271|GO:0008272
Cla03g00847 695 MobiDBLite consensus disorder prediction 73 93 - -
Cla03g00847 695 MobiDBLite consensus disorder prediction 76 93 - -
Cla03g00847 695 Gene3D STAS domain 535 682 IPR036513 -
Cla03g00847 695 ProSiteProfiles STAS domain profile. 575 680 IPR002645 -
Cla03g00847 695 MobiDBLite consensus disorder prediction 1 21 - -
Cla03g00847 695 TIGRFAM sulP: sulfate permease 110 673 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cla03g00847 695 Pfam STAS domain 558 676 IPR002645 -
Cla03g00847 695 PANTHER SULFATE TRANSPORTER 2.2 46 684 IPR030315 GO:0008272|GO:0015116
Cla03g00847 695 PANTHER SULFATE TRANSPORTER 46 684 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g00847 Cla-Chr3:11307918 Cla09g01494 Cla-Chr9:28880621 0 dispersed
Cla03g00847 Cla-Chr3:11307918 Cla03g00848 Cla-Chr3:11354297 0 tandem
Cla07g00900 Cla-Chr7:24742834 Cla03g00847 Cla-Chr3:11307918 0 transposed
Cla11g01499 Cla-Chr11:28656522 Cla03g00847 Cla-Chr3:11307918 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g00847 K17469 - csv:101211892 1112.06