Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla03g00859 | ATGGGCTCCATAGACGTCCAATCAACCAACGTTGAAAATGGATCCGCCGCCGCCTCTGCTGATGGTCGTCAAAAGCCAGTTCCCGCCGACGGTTTGAACCAGACATCTAACGAGCCAGACGGAACGGCGCCTGAGAAGCCTAAGGAATTGGGGCCGACGAAGAAGCGTATGTCCTCCATGCTTCCTCTAGATGTCGGCACCCGCGTCATGTGCCGCTGGAGGGACGGGAAGTACCATCCCGTTAAGGTCATCGAGCGTCGGAAGTTGCAGGCAACTGGTTTTAGTGACTACGAATACTATGTCCATTACACCGAGTTCAATAGGAGACTTGATGAGTGGGTGAAGCTTGACCAACTTGATCTTGATTCAGTGGAGACGGTTGTTGATGAGAAAGTGGAAGACAAGGTAACAGGGTTGAAGATGACCCGACACCAGAAGCGGAAGATTGATGAAACCCATGTTGAGGGTCATGAGGAACTTGATGCGGCCAGCTTAAGGGAGCATGAAGAATTTACGAAAGTGAAAAATATTGCAACAATTGAACTTGGAAGATACGAGATTGAGACATGGTATTTCTCCCCCTTTCCACCCGAGTACAATGACACTACAAAGCTCTATTTTTGTGAGTTTTGTCTCAATTTCATGAAGCGCAAAGAACAGCTCCAGAGACATATGAGGAAGTGTGATCTGAAGCATCCTCCTGGTGATGAAATTTATCGATGTGGTACTTTATCAATGTTTGAGGTTGATGGAAAAAAGAACAAGGTTTATGGGCAGAATCTCTGTTACTTAGCAAAGTTATTTCTGGACCACAAGACTCTCTACTATGATGTCGACCTTTTTCTGTTTTATGTCCTGTGCGAGTGTGATGATCGAGGGTGTCACATGGTTGGATATTTTTCAAAGGAAAAGCATTCAGAGGAATCCTATAATTTGGCATGCATTCTCACCCTTCCTCCTTATCAAAGGAAGGGCTATGGCAAGTTCTTAATAGCTTTTTTTGTGATCTTTTATGAAACCGAGAGATCAGCTTATGAACTCTCCAAGAAGGAAGGTAAAGTTGGCACTCCTGAAAGACCTCTTTCAGACCTTGGGTTGGTGAGCTACAGAGGATACTGGACCAGAGTTCTTTTAGACATCTTGAAAAAGCACAAGGCCAATATCTCTATCAAGGATGTACTATTAGTCATTGGTCTGATATGGATTCTATTGCTTGGCGCATTGGTCATCCCTTTATGTCAGGAGCTAAGTGACATGACAGCTATCAAAGCCGAAGATATTTTGAACACACTTCAGAGCCTGGAGTTGATTCAATACAGGAAAGGGCAGCATGTTATATGTGCTGACCCGAAGGTGCTGGATCGTCATCTCAAAGCTGCTGGTCGTGGGGGCCTAGAGGTCGATGTTAGCAAATTGATCTGGACTCCATACAGAGAACAGGGTTGA | 1446 | 45.23 | MGSIDVQSTNVENGSAAASADGRQKPVPADGLNQTSNEPDGTAPEKPKELGPTKKRMSSMLPLDVGTRVMCRWRDGKYHPVKVIERRKLQATGFSDYEYYVHYTEFNRRLDEWVKLDQLDLDSVETVVDEKVEDKVTGLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDTTKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRCGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFFVIFYETERSAYELSKKEGKVGTPERPLSDLGLVSYRGYWTRVLLDILKKHKANISIKDVLLVIGLIWILLLGALVIPLCQELSDMTAIKAEDILNTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYREQG | 481 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 11775623 | 11785255 | - | ClCG03G009080.1 | Cla03g00859 | 269359 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla03g00859 | 481 | CDD | CBD_MOF_like | 66 | 135 | - | - | |
Cla03g00859 | 481 | Pfam | RNA binding activity-knot of a chromodomain | 63 | 121 | IPR025995 | - | |
Cla03g00859 | 481 | SMART | chromo_7 | 77 | 136 | IPR000953 | - | |
Cla03g00859 | 481 | ProSiteProfiles | MYST-type histone acetyltransferase (HAT) domain profile. | 172 | 476 | IPR002717 | GO:0004402|GO:0006355|GO:0016573 | |
Cla03g00859 | 481 | PANTHER | HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2 | 13 | 393 | - | - | |
Cla03g00859 | 481 | Gene3D | - | 52 | 172 | - | - | |
Cla03g00859 | 481 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 173 | 477 | IPR016181 | - | |
Cla03g00859 | 481 | Pfam | MOZ/SAS family | 233 | 443 | IPR002717 | GO:0004402|GO:0006355|GO:0016573 | |
Cla03g00859 | 481 | Gene3D | - | 173 | 229 | - | - | |
Cla03g00859 | 481 | Gene3D | - | 231 | 476 | - | - | |
Cla03g00859 | 481 | PANTHER | HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2 | 414 | 480 | - | - | |
Cla03g00859 | 481 | Pfam | MYST family zinc finger domain | 174 | 228 | IPR040706 | - | |
Cla03g00859 | 481 | MobiDBLite | consensus disorder prediction | 1 | 59 | - | - | |
Cla03g00859 | 481 | Gene3D | - | 361 | 455 | IPR036388 | - | |
Cla03g00859 | 481 | PANTHER | HISTONE ACETYLTRANSFERASE | 13 | 393 | - | - | |
Cla03g00859 | 481 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Cla03g00859 | 481 | SUPERFAMILY | Chromo domain-like | 54 | 173 | IPR016197 | - | |
Cla03g00859 | 481 | PANTHER | HISTONE ACETYLTRANSFERASE | 414 | 480 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla03g00859 | K11308 | - | csv:101217824 | 874.774 |