Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla03g00956 | ATGGATCTTTACGGGAAAGAACTAATGGAACTTACCGAAAAAGTCAAACTTACAGACAATAACGTGTACAAATACAAGTTATCAGATGCCAACTTCAAACCTTTCATTGGACAAGTTGAGATCTCAAAACCTTTAGATCCAACAAGAGGAACTGCAAAGTGCAGTGGCAGGTTCATTTCTACATTCCACCAAAATATGTGTATACGATGCAAATCACGGCCCGGAAACGTTTATAGCTACGGTGTCATCTTGCTTGAGATCCTCACTACCAGACTGCCAGTTGATGAGAAGTTTGGTGATGGAGTAGACTTGGTGAAATGGGTGCATAGTGCTCCTTTGAGGGGCGAAACACCTGAACAGATACTCGATTCCCAGCTAGGCACGGTTTCGTTTGGCTGGAGGAAGGAGATGCTTGCAGCTCTCAAGATTGCATTGCTCAGCTCTGACAGCATACCAGCCAAAAGGCCAAAAATGAAGAAGATGGTGGAAATGCTTCTGGAGATCAAGCAAAATTGA | 516 | 43.6 | MDLYGKELMELTEKVKLTDNNVYKYKLSDANFKPFIGQVEISKPLDPTRGTAKCSGRFISTFHQNMCIRCKSRPGNVYSYGVILLEILTTRLPVDEKFGDGVDLVKWVHSAPLRGETPEQILDSQLGTVSFGWRKEMLAALKIALLSSDSIPAKRPKMKKMVEMLLEIKQN | 171 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 16487704 | 16490140 | + | ClCG03G009970.1 | Cla03g00956 | 269456 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla03g00956 | 171 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE TYROSINE-PROTEIN KINASE PXC3 | 27 | 168 | - | - | |
| Cla03g00956 | 171 | SUPERFAMILY | Protein kinase-like (PK-like) | 73 | 168 | IPR011009 | - | |
| Cla03g00956 | 171 | Gene3D | Transferase(Phosphotransferase) domain 1 | 16 | 171 | - | - | |
| Cla03g00956 | 171 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 27 | 168 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla03g00956 | Cla-Chr3:16487704 | Cla04g00007 | Cla-Chr4:195927 | 8.25E-07 | dispersed | |
| Cla03g00956 | Cla-Chr3:16487704 | Cla01g02278 | Cla-Chr1:36660917 | 2.33E-16 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla03g00956 | - | - | csv:101215786 | 209.149 |