Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla03g01026 | ATGAAGCTCCAAGTCGCCGACGACGATCTCGACGCCCTTCTTCTTCCTCCTCCTAACTTCTCCATGGTTGAGGACGGCATTTTCCGATCCGGCTTCCCTCAGCCCCTCAATTTCCCCTTCCTCCGCACCCTCAATCTCCGCTCCATCATATATTTGTGTCCTGAACCCTACCCAGAGGAGAATTTGGAGTTTCTTAAAGCTAATAATATCAAGCTTTTTCAATTCAAAATTGAAGGCAAAAAGGAGCCTTTCGTTTCGATTCCAGAGGATGCTATTCTTGAGGCTCTAAAAATCCTGATTGATTTTAGAACATTTTCTAATTTGTTTGCTATTTATCTCTGGTTTTCAGATGTTAGGAATCACCCCATTTTGATCCACTGCAAGCGAGGAAAGCATCGAACAGGCTCGCTCGTTGGTTGCCTGAGGAAGTTTCAGAACTGGTGCTTGAGTTCGGTGTTCGAGGAGTACCAGCGATTTGCAGGCATGAAATCGAGGGTGACGGATCTACAATTCATCGAGAAATTCGACATTGGGTCTCTGAGGCAATGTGTTTACAGCATCATATATCAGTATCAAGGTTATAGCTCAAACAAGAGGAGGCTGTTGTATAGAGAAGAAAACTTGCAAAAGCCTCAAACAACATCAGTTTAG | 651 | 44.09 | MKLQVADDDLDALLLPPPNFSMVEDGIFRSGFPQPLNFPFLRTLNLRSIIYLCPEPYPEENLEFLKANNIKLFQFKIEGKKEPFVSIPEDAILEALKILIDFRTFSNLFAIYLWFSDVRNHPILIHCKRGKHRTGSLVGCLRKFQNWCLSSVFEEYQRFAGMKSRVTDLQFIEKFDIGSLRQCVYSIIYQYQGYSSNKRRLLYREENLQKPQTTSV | 216 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 19567511 | 19569348 | - | ClCG03G010730.1 | Cla03g01026 | 269526 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla03g01026 | 216 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 125 | 135 | IPR016130 | GO:0016311|GO:0016791 | |
Cla03g01026 | 216 | PANTHER | TYROSINE-PROTEIN PHOSPHATASE | 116 | 199 | - | - | |
Cla03g01026 | 216 | PANTHER | TYROSINE-PROTEIN PHOSPHATASE | 10 | 106 | - | - | |
Cla03g01026 | 216 | CDD | PFA-DSP_Siw14 | 19 | 176 | - | - | |
Cla03g01026 | 216 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 15 | 175 | IPR029021 | - | |
Cla03g01026 | 216 | Gene3D | Protein tyrosine phosphatase superfamily | 13 | 179 | IPR029021 | - | |
Cla03g01026 | 216 | PRINTS | Plant and fungal dual specificity phosphatase signature | 14 | 31 | IPR020428 | GO:0016791 | |
Cla03g01026 | 216 | PRINTS | Plant and fungal dual specificity phosphatase signature | 87 | 101 | IPR020428 | GO:0016791 | |
Cla03g01026 | 216 | PRINTS | Plant and fungal dual specificity phosphatase signature | 70 | 84 | IPR020428 | GO:0016791 | |
Cla03g01026 | 216 | PRINTS | Plant and fungal dual specificity phosphatase signature | 51 | 64 | IPR020428 | GO:0016791 | |
Cla03g01026 | 216 | Pfam | Tyrosine phosphatase family | 14 | 178 | IPR004861 | - | |
Cla03g01026 | 216 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 19 | 186 | IPR020422 | GO:0006470|GO:0008138 | |
Cla03g01026 | 216 | PANTHER | TYROSINE-PROTEIN PHOSPHATASE DSP5 | 116 | 199 | - | - | |
Cla03g01026 | 216 | PANTHER | TYROSINE-PROTEIN PHOSPHATASE DSP5 | 10 | 106 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla03g01026 | Cla-Chr3:19567511 | Cla09g01043 | Cla-Chr9:11085324 | 8.07E-67 | dispersed | |
Cla03g01026 | Cla-Chr3:19567511 | Cla02g01771 | Cla-Chr2:32683792 | 7.78E-76 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla03g01026 | K18045 | - | csv:101211082 | 357.066 |