Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g01134 ATGACCAATCTCCCTCCAACCTTCTTCCTCTCTGCAGTTCAAAACCTCTTTCTCAACGTAACAATGGAGGATTTCTTAATCTCTCTCTTAATCCTCTTCCTCTTTCTCCTCTCTCTCACTTTCTTCATCCTCTTCCACAAGCACAAATCCTTGTTCTCCTATCCCAACGTTCCTCCCGGCGCCATAGGCTTTCCCATTCTTGGTGAGAGCCTCGAGTTCTTGTCCACTGGCTGGAAAGGCCACCCTGAGAAGTTCATCTTCGACCGTTTGAATAAGTACAAGTCTGATGTCTTCAAAACCTCCATTGTCGGCGTTCCGGCCGCCATTTTCTGCGGCCCTGCCTGCAACAAGTTCCTCTTCTCTAACGAGAATAAACTCGTTACTTCTTGGTGGCCGGATTCCGTTAACAAGATCTTTCCCTCTTCCACTCAGACTAACTCCAAAGTGGAAGCTAAGAAACTCAAGAAATTCCTCCCGCAATTCCTTAAGCCGGAAGCGCTTCAGCGTTATATTGGAATTATGGATGAACTCGCTCAACGCCATTTCGCTTCCTTCTGGGAGAACAGGGAAGAGGTCCTTGTGTTTCCTCTCGCTAAAAGGTTCACATTCTCGCTGGCGTGCCGATTGTTCGTGAGCGTAGACGATGAAATCCAGGTGGAGAGATTATCGAGACCGTTTGAGCACATTGTGGCAGGAATCATATCGTTGCCGATTGATTTACCAGGAACGCCGTTCAATCGAGCAATAAAGGCATCGAATTTCATCAGAAAGGAACTGGTGGCGATCGTGAGGCAGAGGAAATGGGATCTGGCGGAAGGAAAGGCGTCGCCGACGCAGGACATTCTGTCTCACATGCTTCTCACGTGCGATGAGAACGGATTTTACATGAACGAGTCCGATATCGCCGATAAGATTCTGGGGCTGTTGATCGGCGGCCATGACACTACCAGTGTCGCATGCACCTTCATCCTTAAGTTCCTTGCTGAGCTTCCTCATGTGTACGATGGCGTCTACGCGGAGCAAATGGAAATAGCAAAAGCGAAAGCCCCAGGGGAAGCATTGAAATGGGAAGACATAAACAAGATGAAATATTCATGGAATGTGGCCTGTGAGGTTCTAAGAATTGCTTCCCCAGTCCAAGGTGCCTTTAGGGAAGCCTTAAACGACTTCGTTTTTAATGGCTTCTACATTCCCAAGGGCTGGAAGCTATATTGGAGTGCAAATGGAACACACAAAAACCCAGAGTACTTCCCAGAGCCGTACAAGTTTGAGCCAGCAAGATTTGAAGGGAATGGGCCATTGCCCTACACTTACGTGCCTTTTGGGGGAGGGCCAAGGATGTGCCCTGGAAAAGAGTATGCAAAGCTTGAGATTTTGGTGTTCATGCATAATTTGGTCAAGAGATTCAAATGGGCAAAGCTACTTGAAAAGGAGAATATCATTGTTGACCCATTGCCAATCCCTCAAAAAGGTCTCCCCGTTCGCCTTTTTCCTCGTCAACCTCTCTCTCTTTAG 1515 47.72 MTNLPPTFFLSAVQNLFLNVTMEDFLISLLILFLFLLSLTFFILFHKHKSLFSYPNVPPGAIGFPILGESLEFLSTGWKGHPEKFIFDRLNKYKSDVFKTSIVGVPAAIFCGPACNKFLFSNENKLVTSWWPDSVNKIFPSSTQTNSKVEAKKLKKFLPQFLKPEALQRYIGIMDELAQRHFASFWENREEVLVFPLAKRFTFSLACRLFVSVDDEIQVERLSRPFEHIVAGIISLPIDLPGTPFNRAIKASNFIRKELVAIVRQRKWDLAEGKASPTQDILSHMLLTCDENGFYMNESDIADKILGLLIGGHDTTSVACTFILKFLAELPHVYDGVYAEQMEIAKAKAPGEALKWEDINKMKYSWNVACEVLRIASPVQGAFREALNDFVFNGFYIPKGWKLYWSANGTHKNPEYFPEPYKFEPARFEGNGPLPYTYVPFGGGPRMCPGKEYAKLEILVFMHNLVKRFKWAKLLEKENIIVDPLPIPQKGLPVRLFPRQPLSL 504
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 23523395 23531529 - ClCG03G011800.2 Cla03g01134 269634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g01134 504 Pfam Cytochrome P450 58 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01134 504 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01134 504 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01134 504 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01134 504 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01134 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Cla03g01134 504 SUPERFAMILY Cytochrome P450 51 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01134 504 Gene3D Cytochrome P450 48 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01134 504 PANTHER CYTOCHROME P450 26 28 497 - -
Cla03g01134 504 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01134 504 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01134 504 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01134 504 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE 28 497 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01134 Cla-Chr3:23523395 Cla05g01497 Cla-Chr5:24186335 8.05E-102 dispersed
Cla06g01400 Cla-Chr6:27533301 Cla03g01134 Cla-Chr3:23523395 0 transposed
Cla03g01134 Cla-Chr3:23523395 Cla05g01495 Cla-Chr5:24133776 8.25E-121 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g01134 K20667 - csv:101206033 859.751