Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g01226 ATGGAAGCTGCTTTCTTATTCATTAGTCAATTGGCACACCATTATTCACCAATAGCCATATCCAAAACTTTCATTGTGTTTGTATTTGTGGCTTTCATTTCTGTCATGTTTTCCCAATGTTATAACCTCAAAAGAAAACACTTAAGCCGACAACAAGCACCTCTTCCACCAGGCCCAAAGCCATGGCCTATTGTTGGGTGCCTCCCATCAATGTTGTTGAGGAAAAATTCTCCAACACACCAATGGATTCATTCAGTAATGAAGCAATTCAACACTGAAATTGCCTCCATACGCCTTGGAAACACTTACATAATCCCTATCACTTCCCCACAACTCGCTCTTCAATTTCTTAAGACCTATGATTCTGTCTTTGCATCACGTTCTTCCATTTCCAACACTGTTCATATCTTAAGTCGTGGATATCTCACCACAGCATTTTCGTCTTTGGGAGACCAATGGAAGAAGATGAGAAGAATTCTCTCATCAGAAGTACTCAATCCATCAACTCTCCACCGAATGCTTGGCCAAAGAAACGCTGAAGCTGATTCTCTTTTACACTATATTTTCACCCAAACCAGTAGTAATGGAGGAGGTGCGGTGATTAACGTTAGAAGCATAGCACAACATTATTGCGGTAACATTATTCGAAGAATGCTATTCAACAGAAGATATTATGGCAAAGGGAAGGAAGATGGGGGGCCAACTTTTCAAGAAGAAGAACATAATCAAGCATTGTTGACCATTCTTAGACATGTTAATGCATTTTCTATATCAGATTTCATGCCCTATTTGAAGCCTTTTGATTTAGATGGACATCAAAAAATTATGAAGAATGCTTTGAATGTCCTTAGAAAGTATGACGACCCTATCATAGATGAGAGAGTGCAACAATGGAAGAAAGGTGAGAAAATAGATGGGGTAGAGGACATTCTTGATATTCTCCTTTCACTTAAAGATGAGAATGCAAATTCATTATTGTCAATCGAAGAGATCAAGGCTCAAATCACAGAGTTACAAATTGCGACAGTAGATAATCCATCGAATGCAGTGGAATGGGCAATGGCAGAACTAATCAATCAACCAAAAGTTCTCAAGAAAGCCGTTGAAGAATTGGACGAAGTAGTTGGAAAAGAAAGGCTAGTTCAAGAATCTGATATCCCAAAACTCAAGTATCTCACCGCTTGTATTAGAGAATCTTTTCGACTTCATCCATTTTCACCTTTCAATATTCCTCATGTCTCAAACTCTGACATCATTGTGAATGGTTACTTAATTCCCAAAGGTAGTGAAGTTTTGCTAAGTCGTTTAGGTCTTGGCCGAAACTCAAGAATTTGGGAAAATCCAAACAGATTTAATCCAAAACGTCACCTAAAAGATGAGACAGTTGAATTGGGATTATCAGAACCTAGTCTACGATTCATCACCTTTACTAGAGGGAGGAGAGGCTGCATTGGTAGTTCACTTGGCACTAACATTACCATGATGATATTTGCTAGACTTCTACAAGGATTTTCATGGAGCTTACCGTCAGGAATTAAAAAAATTGACTTCTCAAAAACTGATCATGAACTCTCCCTCATGAAACCATTACAGCTACATGCAAGGTCACGTCTCTCTCATAATCAGAAGATTTCTCTAAAGCCCTTGAAGTCAGAAACTTCAAAGGTCGATCAACAAGCAGATGTCGATCCAAGCCAAACAATAAGCCAGAGGCCGATCCAAATCGATCAACAAGCCAAAGGTCGATCCAAGAAGATCATTAAGTGA 1767 38.99 MEAAFLFISQLAHHYSPIAISKTFIVFVFVAFISVMFSQCYNLKRKHLSRQQAPLPPGPKPWPIVGCLPSMLLRKNSPTHQWIHSVMKQFNTEIASIRLGNTYIIPITSPQLALQFLKTYDSVFASRSSISNTVHILSRGYLTTAFSSLGDQWKKMRRILSSEVLNPSTLHRMLGQRNAEADSLLHYIFTQTSSNGGGAVINVRSIAQHYCGNIIRRMLFNRRYYGKGKEDGGPTFQEEEHNQALLTILRHVNAFSISDFMPYLKPFDLDGHQKIMKNALNVLRKYDDPIIDERVQQWKKGEKIDGVEDILDILLSLKDENANSLLSIEEIKAQITELQIATVDNPSNAVEWAMAELINQPKVLKKAVEELDEVVGKERLVQESDIPKLKYLTACIRESFRLHPFSPFNIPHVSNSDIIVNGYLIPKGSEVLLSRLGLGRNSRIWENPNRFNPKRHLKDETVELGLSEPSLRFITFTRGRRGCIGSSLGTNITMMIFARLLQGFSWSLPSGIKKIDFSKTDHELSLMKPLQLHARSRLSHNQKISLKPLKSETSKVDQQADVDPSQTISQRPIQIDQQAKGRSKKIIK 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 26462460 26465518 + ClCG03G012780.2 Cla03g01226 269726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g01226 588 Gene3D Cytochrome P450 48 548 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01226 588 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 30 540 - -
Cla03g01226 588 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01226 588 PRINTS E-class P450 group I signature 473 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01226 588 PRINTS E-class P450 group I signature 350 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01226 588 PRINTS E-class P450 group I signature 393 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01226 588 PRINTS E-class P450 group I signature 434 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01226 588 PRINTS E-class P450 group I signature 483 506 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01226 588 SUPERFAMILY Cytochrome P450 56 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01226 588 MobiDBLite consensus disorder prediction 543 588 - -
Cla03g01226 588 Pfam Cytochrome P450 56 524 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01226 588 PANTHER PHENYLALANINE N-MONOOXYGENASE 30 540 - -
Cla03g01226 588 MobiDBLite consensus disorder prediction 543 577 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01226 Cla-Chr3:26462460 Cla03g01232 Cla-Chr3:26559885 0 dispersed
Cla03g01229 Cla-Chr3:26508904 Cla03g01226 Cla-Chr3:26462460 2.97E-22 dispersed
Cla03g01230 Cla-Chr3:26509163 Cla03g01226 Cla-Chr3:26462460 4.27E-36 dispersed
Cla03g01225 Cla-Chr3:26420733 Cla03g01226 Cla-Chr3:26462460 1.95E-122 tandem
Cla03g01226 Cla-Chr3:26462460 Cla03g01227 Cla-Chr3:26495066 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g01226 - K12153 csv:101217397 875.159