Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g01227 ATGAAGCAATTCAATACTGAAATTGCTTTCATACGCCTTGGAAATACTTACATAATTCCCGTGACTTCTCCAGAACTAGCTCTTGAATTTCTTAAGACATATGATTCTATCTTTGCATCACGTTCCTCCATTTCCAACACTGTTCATATCTTAAGCAATGGATATGTCACCACAGTTTTTGCATCGATAGGAGACCAATGGAAGAAGATGAGAAGAATTCTTGCATCACAAATACTCAATCCTTCAACTCTTCATCGATTGCTTGGTCATAGAATCGCCGAGGCCGATACTCTTTTACGCTATATTTTCACCCAAACGCGTGATAATGGAGGAGGTGCAACCATAAATGTTAGAAGTATAACACAACATTATTGTGGTAACATTATTAGAAGAATGCTATTCAACAGAAGGTACTATGGCAAAGGGACGGAAGATGGAGGACCAACTTTTGAAGAAGAAGAGCACAATCAAGCATTGTTAACAATTCTTACATATGTTCATGCATTTTCTATATCAGATTTCATACCTTGTTTGAAGCCTTTGGATTTAGATGGACATGAAAAAATTATGAACAAGGCTTTGAATGTCCTCCGAAAGTATTACGAACCCATTATTGATGAGAGAGTACAAAGATGGAAATCAGATGAGAAAATGGAAGGGGTGACGGACGACATTCTTGATATCCTCATTTCACTTAAAGATGAGAATAAAAAATCATTATTGTCAGTCGAAGAGATTAAGGCTCAAATCACGGAGTTACAAATTGCAACAATAGATAATCCTTCAAATGCAGTGGAATGGGCTATGGCAGAGTTGATCAATAAACCAAAAATTCTTGAAAAAGCCGTTGAGGAATTAGACAAAGTAGTTGGAAGAGAAAGGTTAGTTCAAGAATCTGATATCCCAAAACTCAAATATCTCACAGCTTGTGCTAGAGAATCTTTTCGACTTCATCCATTTTCACCCTTCAACGTTCCTCACATTTCCACCTCTGACACCATTGTGGCCGGTTACTTTATTCCCAAAGGAAGTGAAGTGTTGCTCAGTCGTTTAGGTCTTGGTCAAAACCCAAGGATTTGGGAGGATCCAATGACATTTGATCCAGAACGTCATCTAAAAGATGGGTCAATTGAATTGGGAATTTCAGAACCTGATCTACGATTCATCACCTTTACTAGAGGGAGAAGAAGTTGCATTGGTAGCTCACTTGGGACTAACATTACAATGATGCTATTTGCTAGACTTCTACAAGGGTTTTCATGGAGCTTATTGCCAGGAGTCACAAAGATAGACTTCTCTGAAACAGATGAACGCACTCTCCCAAAGCCATTGCATCTGCATGCAGAACCACGCTTATCTTATATTATGTATCCAACTTATTGA 1383 38.25 MKQFNTEIAFIRLGNTYIIPVTSPELALEFLKTYDSIFASRSSISNTVHILSNGYVTTVFASIGDQWKKMRRILASQILNPSTLHRLLGHRIAEADTLLRYIFTQTRDNGGGATINVRSITQHYCGNIIRRMLFNRRYYGKGTEDGGPTFEEEEHNQALLTILTYVHAFSISDFIPCLKPLDLDGHEKIMNKALNVLRKYYEPIIDERVQRWKSDEKMEGVTDDILDILISLKDENKKSLLSVEEIKAQITELQIATIDNPSNAVEWAMAELINKPKILEKAVEELDKVVGRERLVQESDIPKLKYLTACARESFRLHPFSPFNVPHISTSDTIVAGYFIPKGSEVLLSRLGLGQNPRIWEDPMTFDPERHLKDGSIELGISEPDLRFITFTRGRRSCIGSSLGTNITMMLFARLLQGFSWSLLPGVTKIDFSETDERTLPKPLHLHAEPRLSYIMYPTY 460
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 26495066 26496567 + ClCG03G012790.1 Cla03g01227 269727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g01227 460 Gene3D Cytochrome P450 1 454 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01227 460 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 456 - -
Cla03g01227 460 PANTHER PHENYLALANINE N-MONOOXYGENASE 1 456 - -
Cla03g01227 460 Pfam Cytochrome P450 7 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01227 460 PRINTS E-class P450 group I signature 388 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01227 460 PRINTS E-class P450 group I signature 349 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01227 460 PRINTS E-class P450 group I signature 398 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01227 460 PRINTS E-class P450 group I signature 308 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01227 460 PRINTS E-class P450 group I signature 265 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01227 460 PRINTS E-class P450 group I signature 124 142 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01227 460 SUPERFAMILY Cytochrome P450 7 451 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01227 Cla-Chr3:26495066 Cla03g01234 Cla-Chr3:26598944 0 dispersed
Cla03g01231 Cla-Chr3:26519526 Cla03g01227 Cla-Chr3:26495066 1.99E-63 dispersed
Cla03g01235 Cla-Chr3:26607140 Cla03g01227 Cla-Chr3:26495066 3.07E-60 dispersed
Cla03g01227 Cla-Chr3:26495066 Cla03g01229 Cla-Chr3:26508904 1.10E-20 proximal
Cla03g01226 Cla-Chr3:26462460 Cla03g01227 Cla-Chr3:26495066 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g01227 - K12153 cpep:111780516 742.265