Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g01232 ATGGAAGTTGCTTTCTTATTCTTTAGTCAATTGGCACACCAAAACTCTTCAATAGCCATATCCGAAACTTTCATTGTGTTTGTATTTATGGCTTTCATTTCTATCATATTTTTCCAATGTTATAACCTCCAAAGAAAACACTCAGTCGGACGACAACCACCTCTCCCACCAGGCCCAAAGCCATGGCCACTCCTAGGTTGCCTCCCAACATTGTTAACCAACAAAACCCCAGCACACCAATGGATTCATTCAGTAATGAAGCAATTCAACACTGAAATAGCTTCCATACGCCTTGGAAATACTTACATAATCCCTGTCACTTCTCCACAACTCGCTCTTCAATTTCTTAAGACCTATGATTCTGTCTTTGCATCACGTTTCTCTATTTCTAACGCTGTTGATATCTTAACCCGTGGATATCTCACCACAGCATTTTCACCGATGGGAGAGCAATGGAAGAAGATGAGAAGAATTATGGCATCACAAGTACTTAATCCGACCACACTTCATCGAATGATTGGCCAAAGAACCGCCGAAGCTGATATTCTTTTACGCTATATTTTCACCCAAACTAGTAATAATAGAGGAGGTGCATTGATTAATATTAGAAGCATAACACAACATTATTGTGGTAATATTATCAGAAGAATGCTTTTCAACAAAAGGTATTATGGTAAAGGGAGGGAAGATGGGGGGCCAACTTTTGAAGAAGAAGACCATAATCAAGCATTGTTGACCATTGTTAGGCATGTTAATGCATTTTCTATATCAGATTTCATACCTTGTTTGAAGCTTTTTGATTTAGATGGACATGAAAAAATTGTGAAGAAGGCTTTGAGTGTCATTCAAAAATATGATGAGCCCATTGTAGATGAGAGAGTGCAAGAATGGAAGAAATATGAGAAAAAAGAAGGGATAGAGTACATTCTTGATATCCTCATTTCACTTCAAGATGAGAATGGAAAATCGTTGTTGTCAGTCGAAGAGATTAAAGCTCAAATTGCGGAGCTACAAATTGCAACGATAGATAATCCTTCAAATGCAGTGAAATGGGCAATGGCAGAAATGATGAATCAACCAAAAATTTTCCAGAAAGCCGTTGAAGAACTGGACGAAGTAGTTGGAAGAGAAAGGCTAGTTCAAGAATCAGATATCCCAAAACTCAAGTATCTCACTGCTTGCATTAGAGAATCTTTTCGACTTCATCAATTTTCACCTTTCAATATTCCTCATGTTTCAAACTCTGACATTATTGTGGATGGTTACTTTATTCCCAAAGGTAGTCAAGTCTTACTTAGTCGTCCAGGTCTTGGTCGAAATCCAAGAATTTGGGAGGATCCAATCAACTTTAATCCAGAACGTCATTTAAAAGATGAGACAATTGAATTGGGAGTATCAGAACCAAGTCTTCAATTTATCACCTTCACTAGAGGGAGGAGAGGACAACCACGTACTCCACTCCCATACATCAAGTGTACACATTCAACTGAGAGAGAATCAGAGGATCAAGTATTAGAGATCAAACCACATCTGCATCAAATCTACATCAACTTAAGTTCAAATCCACGAATCAAGTTTTTTCGGAAACCTCGTGCGAACAAATTGGCACGCCTAGTGGGACATCTCTACCTCTCATCTCTTTCTCAACAATTAAACCAAGTAAAGGTATCCAAGAAAGTTGCATCCAAAACTCCTGCTGCCAGCTACACCTACACAAGACCCATCACCTGCAGTCGCTCAAAGGAGGTCATGCAGGAGAAGGAACAAGGTTCCGTCGTTGTAGAGAACATCTTGAGGCAGTTGACGGAATCCTCTAAAGGCAGGATTGTCATCAAAGAAAATCCTTTGTTTAACAAATCTGCTTCTACTTCTAATCGCTCTAAGAAAGAATCACGCCCTGATGTGATGTCTATCATGATGGCCAATGAAACGGCAGAGTCAATCATGGCAGAAAGGTAG 1959 39.36 MEVAFLFFSQLAHQNSSIAISETFIVFVFMAFISIIFFQCYNLQRKHSVGRQPPLPPGPKPWPLLGCLPTLLTNKTPAHQWIHSVMKQFNTEIASIRLGNTYIIPVTSPQLALQFLKTYDSVFASRFSISNAVDILTRGYLTTAFSPMGEQWKKMRRIMASQVLNPTTLHRMIGQRTAEADILLRYIFTQTSNNRGGALINIRSITQHYCGNIIRRMLFNKRYYGKGREDGGPTFEEEDHNQALLTIVRHVNAFSISDFIPCLKLFDLDGHEKIVKKALSVIQKYDEPIVDERVQEWKKYEKKEGIEYILDILISLQDENGKSLLSVEEIKAQIAELQIATIDNPSNAVKWAMAEMMNQPKIFQKAVEELDEVVGRERLVQESDIPKLKYLTACIRESFRLHQFSPFNIPHVSNSDIIVDGYFIPKGSQVLLSRPGLGRNPRIWEDPINFNPERHLKDETIELGVSEPSLQFITFTRGRRGQPRTPLPYIKCTHSTERESEDQVLEIKPHLHQIYINLSSNPRIKFFRKPRANKLARLVGHLYLSSLSQQLNQVKVSKKVASKTPAASYTYTRPITCSRSKEVMQEKEQGSVVVENILRQLTESSKGRIVIKENPLFNKSASTSNRSKKESRPDVMSIMMANETAESIMAER 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 26559885 26566515 + ClCG03G012830.2 Cla03g01232 269732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g01232 652 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 29 484 - -
Cla03g01232 652 SUPERFAMILY Cytochrome P450 56 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01232 652 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01232 652 PRINTS E-class P450 group I signature 433 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01232 652 PRINTS E-class P450 group I signature 116 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01232 652 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01232 652 PANTHER PHENYLALANINE N-MONOOXYGENASE 29 484 - -
Cla03g01232 652 Pfam Cytochrome P450 56 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01232 652 Gene3D Cytochrome P450 50 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01226 Cla-Chr3:26462460 Cla03g01232 Cla-Chr3:26559885 0 dispersed
Cla03g01232 Cla-Chr3:26559885 Cla03g01234 Cla-Chr3:26598944 0 dispersed
Cla10g00676 Cla-Chr10:10358340 Cla03g01232 Cla-Chr3:26559885 2.00E-26 dispersed
Cla03g01230 Cla-Chr3:26509163 Cla03g01232 Cla-Chr3:26559885 4.13E-35 proximal
Cla03g01231 Cla-Chr3:26519526 Cla03g01232 Cla-Chr3:26559885 1.90E-48 tandem
Cla03g01232 Cla-Chr3:26559885 Cla03g01233 Cla-Chr3:26570058 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g01232 - K12153 csv:101217397 749.199