Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g01233 ATGAAAGCTTCCTTATTCATTAGTCAATTGGCTGATGCATATCAAAATTGTGCAAAAGCAGCCATAGCCAAAACCTTCATTTCTATCGTTTTATTCATATCTTCCATTACTATTTATGTTATTAAGTTCTCTCAATATTACCGCAAAAGAAAGTCCTTAGTCCGGCGGCTACCACCAGGCCCAAAGCCATGGCCCCTCCTCGGCTGTCTTCCAGCAATGTTGAGGAACAAAAACTTGGCAATACACCAATGGATTCATGAAATAATGAAGCAATTCAACACTGAAATTGCTTGCATCCGTCTCGGATCAAATACCCACATAATTCCTGTGGCTTCTCCAGAACTCGCTCTTGAGTTTTTAAAGACACACGATTCTGTTTTTGGATCACGACCCACTTCCATGACTGCGGAGATGTTGAGCCGTGGATATCTAAGTGCAGTTCTTTCACCCACGGGGGATCAATGGAAGAAGATGAGAAGGATCCTGGTTTCTCAAGTACTCAATCCTTCGACCCTCCATGGAATGCTTGGCCAAAGAACAAAGGAAGCTGATACTCTTCTACATTACATTTTCAGCCTCAGCAAAAATGGTGAAGCGGTCAACATAAGAAGCATTGCACAACATTATTGCAGTGGCATTATTAGAAGAATGGTATTCAATAGAAGATACTATGGAAAAGGGAGGGAAGATGGAGGAGCATCTTTTGAAGAAGAGAACCATAATCAAGCATTGTTTACAATTCTAACGCATCTTAATGCATTTTCCATATCAGAATTTATGCCTTGCTTGAAGCCATTCGATCTGAATGGACACAAGAAGATAGTAAAAAGGGCTTTGAAAGTCATAAGAGATCTTGACGAACCCATAATAGAGGAAAGAGTGAAAGAATGGAGAGATGGGAAGAAAAAGGAGGTGGAGGACATCCTTGATATTCTTATCTCCCTCAAAAATGAGAATGGTAAATCATTGTTGTCAATAGAAGAGATTAAGGCTCAAGTCACGGAGTTGCAACTTGCAACCATAGATAATCCTTCAAACGCAGTGGAATGGGCAATGGCAGAGTTACTCAATCAACCAAAAATTCTAGAAAACGCTATTGAAGAATTGGACCAAGTGGTTGGAAGAGATAGGCTGGTTCAAGAATCAGATATACCTAATCTCAAGTATCTCACAGCTTGTATTAGAGAATCTTTTCGACTTCATCCATTTTCACCCTTCAATGTTCCTCATGTTTCCAACGATGACATTGTTGTGGCTGGCTACTTCATCCCTAAAGGTAGCCAAGCTTTGTTATGTCGTTTGGGTCTCGGTCGAAACCCAAGGATTTGGAAGGATCCATTGAGATTTGATCCAGAACGTCATTTAAAAGATGGAACAGTTGAATTAGGAATTTCAGAACCTAGTCTTCGATTCATCACCTTCACTAGAGGAAGGAGGGGTTGCATTGGTTCCTCACTTGGCACTAACATTACTATGATGTTATTTGCTAGACTTCTGCAAGGATTTTCATGGAGCTTATTGTCAGGAATCACAAAGGTAGACTTCTCTAAAACTCAAGAACTTTCTCTACTAGAACCCTTGCATTTGCATGCAGAACCACGTCTATCTCATAAATCTCGTCGATCTTTCTCAATTCAATCGAAGAAGAAGAAGTCGATTGTAAAACTCGAAGAAAAGGAAGAAGAATCCGATCGTTCAACTGAATGTTGA 1710 40.18 MKASLFISQLADAYQNCAKAAIAKTFISIVLFISSITIYVIKFSQYYRKRKSLVRRLPPGPKPWPLLGCLPAMLRNKNLAIHQWIHEIMKQFNTEIACIRLGSNTHIIPVASPELALEFLKTHDSVFGSRPTSMTAEMLSRGYLSAVLSPTGDQWKKMRRILVSQVLNPSTLHGMLGQRTKEADTLLHYIFSLSKNGEAVNIRSIAQHYCSGIIRRMVFNRRYYGKGREDGGASFEEENHNQALFTILTHLNAFSISEFMPCLKPFDLNGHKKIVKRALKVIRDLDEPIIEERVKEWRDGKKKEVEDILDILISLKNENGKSLLSIEEIKAQVTELQLATIDNPSNAVEWAMAELLNQPKILENAIEELDQVVGRDRLVQESDIPNLKYLTACIRESFRLHPFSPFNVPHVSNDDIVVAGYFIPKGSQALLCRLGLGRNPRIWKDPLRFDPERHLKDGTVELGISEPSLRFITFTRGRRGCIGSSLGTNITMMLFARLLQGFSWSLLSGITKVDFSKTQELSLLEPLHLHAEPRLSHKSRRSFSIQSKKKKSIVKLEEKEEESDRSTEC 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 26570058 26574844 - ClCG03G012840.1 Cla03g01233 269733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g01233 569 Gene3D Cytochrome P450 42 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01233 569 PRINTS E-class P450 group I signature 115 136 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01233 569 PRINTS E-class P450 group I signature 481 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01233 569 PRINTS E-class P450 group I signature 471 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01233 569 PRINTS E-class P450 group I signature 432 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01233 569 PRINTS E-class P450 group I signature 391 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01233 569 PRINTS E-class P450 group I signature 209 227 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01233 569 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01233 569 MobiDBLite consensus disorder prediction 536 569 - -
Cla03g01233 569 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 36 538 - -
Cla03g01233 569 MobiDBLite consensus disorder prediction 550 569 - -
Cla03g01233 569 PANTHER PHENYLALANINE N-MONOOXYGENASE 36 538 - -
Cla03g01233 569 Pfam Cytochrome P450 58 526 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01233 569 SUPERFAMILY Cytochrome P450 58 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01083 Cla-Chr3:21497865 Cla03g01233 Cla-Chr3:26570058 0 dispersed
Cla03g01223 Cla-Chr3:26393911 Cla03g01233 Cla-Chr3:26570058 0 dispersed
Cla03g01225 Cla-Chr3:26420733 Cla03g01233 Cla-Chr3:26570058 2.07E-142 dispersed
Cla03g01233 Cla-Chr3:26570058 Cla05g00091 Cla-Chr5:871282 5.54E-72 dispersed
Cla03g01232 Cla-Chr3:26559885 Cla03g01233 Cla-Chr3:26570058 0 tandem
Cla03g01233 Cla-Chr3:26570058 Cla03g01234 Cla-Chr3:26598944 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g01233 - K12153 csv:101216819 844.728