Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g01234 ATGAAAGCTTTGTTATTGATCATTCAATCATCATATCACAACTCTGTAAAAGCAACCATAGCTATAACCTTCATTGCTATCATTTTATTCATATCTTCCATTATTTATGTTTTTAAGTTTTCTCAACATAACCCCAAAAGAAAGCCCTTAGTACGGCGGCTGCCACCGGGCCCAAAGCCATGGCCTCTCCTCGGCTGCCTTCCAGCAATGTTGTGGAACAAAAACTCGCCAACTCACCTATGGATTCATGAAATAATGAAGCAATTCAACACTGAAATTGCATGTATCCGTCTGGGATCAAATACCCACATAATTCCTGTAACTTCCCCAGAACTCGCTCTTGAATTTCTAAAGACACATGATGTTGTCTTCGGATCACGACCCATTTCAATGACTGCTGAGATATTGAGTCGCGGATATCTCAGTACAGTTCTTTCACCCATGGGAGATCAATGGAGGAAGATGAGAAGGATACTTGTTTCTCAAGTACTCAATCCTTCGACCCTCCATGGAATGCTTGGCCAAAGAACAAAGGAAGCTGATACTCTTCTTCGCTACATTTTCATCCTCACAAGAAACGGAGAAGCCATTGACATAAGAAGCATTACACGACATTATTGCGGTAACATTAGTAGAAGAATGATGTTTAATAGAAGATACTATGGAAAAGGGAGGGAAGATGGAGGACCAACTTTTGAAGAAGAAGACCATACTCAAGCATTGTTTACCATTCTTCGGCATGTTCATGCATTTTCTATATCAGATTTCATACCTTTTTTGAAGCCATTGGATTTGGATGGACATGGGAAGATTCTAAAAGATGCTTTGAATTCCATACAAAGGTATGATGATCCCATTATAGAGGAACGAGTGCAACAATGGAAAGATGGGAAGAAGAAGAAGAAGGTCGAGGTAGATGACATTCTTGATATCCTTCTCTCACTTAAAGATGAGAATGGAAAATCATTGTTGTCAATCCATGAGATTAAGGCCCAAATCATAGAGCTACAAATTGCAACAATAGATAATCCTTCAAATGCAGTGGAATGGACAATGGCAGAGTTACTCAATCAACAAAAATTTCTCCAAAAAGCTATTGAAGAATTGGACGAAGTAGTTGGAAGAGAAAGGTTGGTTCAAGAATCAGATATCCCAAAACTCAAGTATCTCACAGCTTGTGTAAGGGAATCTTTTCGTCTTCATCCATATTCATCCTTCAATGTTCCTCACGTTTCCAACTCTGACATTGTCGTAGCTGGCTACTTTATCCCAAAAGGTAGCCAAGTTTTGCTATCTCGTCTAGGTCTTGGGCGAAATCCAAGGATTTGGGAGGATCCATTAAGATTTGATCCAGAACGTCATCTAAAAGATGGAACAGTTGAATTGGGAATTTCAGAACCCAATCTTAGATTCATCACCTTCACTAGAGGTAGGAGAGGTTGTATTGGTACCTCACTTGGCACTAACATCACTATGATGCTGTTTGCTAGACTTCTACAAGGATTTTCATGGAGCCTATTGCCGGGAATCACAAAGATAGATTTCTCTGAAACTCACGGACTCTCTCTATCAAAGCCATTGCATTTGCATGCAAAACCACGTCTATCTCATAATATGTACCAAATACTTATTGATCATCAACCATAG 1647 39.53 MKALLLIIQSSYHNSVKATIAITFIAIILFISSIIYVFKFSQHNPKRKPLVRRLPPGPKPWPLLGCLPAMLWNKNSPTHLWIHEIMKQFNTEIACIRLGSNTHIIPVTSPELALEFLKTHDVVFGSRPISMTAEILSRGYLSTVLSPMGDQWRKMRRILVSQVLNPSTLHGMLGQRTKEADTLLRYIFILTRNGEAIDIRSITRHYCGNISRRMMFNRRYYGKGREDGGPTFEEEDHTQALFTILRHVHAFSISDFIPFLKPLDLDGHGKILKDALNSIQRYDDPIIEERVQQWKDGKKKKKVEVDDILDILLSLKDENGKSLLSIHEIKAQIIELQIATIDNPSNAVEWTMAELLNQQKFLQKAIEELDEVVGRERLVQESDIPKLKYLTACVRESFRLHPYSSFNVPHVSNSDIVVAGYFIPKGSQVLLSRLGLGRNPRIWEDPLRFDPERHLKDGTVELGISEPNLRFITFTRGRRGCIGTSLGTNITMMLFARLLQGFSWSLLPGITKIDFSETHGLSLSKPLHLHAKPRLSHNMYQILIDHQP 548
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 26598944 26600819 - ClCG03G012850.2 Cla03g01234 269734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g01234 548 PANTHER PHENYLALANINE N-MONOOXYGENASE 29 540 - -
Cla03g01234 548 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 29 540 - -
Cla03g01234 548 PRINTS E-class P450 group I signature 112 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01234 548 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01234 548 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01234 548 PRINTS E-class P450 group I signature 391 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01234 548 PRINTS E-class P450 group I signature 432 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01234 548 PRINTS E-class P450 group I signature 471 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01234 548 PRINTS E-class P450 group I signature 481 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01234 548 SUPERFAMILY Cytochrome P450 55 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01234 548 Pfam Cytochrome P450 55 526 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01234 548 Coils Coil 352 372 - -
Cla03g01234 548 Gene3D Cytochrome P450 40 540 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01227 Cla-Chr3:26495066 Cla03g01234 Cla-Chr3:26598944 0 dispersed
Cla03g01232 Cla-Chr3:26559885 Cla03g01234 Cla-Chr3:26598944 0 dispersed
Cla03g01234 Cla-Chr3:26598944 Cla01g01874 Cla-Chr1:33548993 6.54E-77 dispersed
Cla03g01233 Cla-Chr3:26570058 Cla03g01234 Cla-Chr3:26598944 0 tandem
Cla03g01234 Cla-Chr3:26598944 Cla03g01235 Cla-Chr3:26607140 2.36E-55 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g01234 - K12153 csv:101216819 800.431