Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g01235 ATGCTTACTAAGCTTTGGTGTCGTGGTCATACTTTGCATGTTTCTTCATTGTTCTCCAATGTTGTGATTCCATTTGTAGACACCTTGATGAAATCAACTGTGAGTTCTTCCGTAGTATTACCTAAGGATCCCTACAACAAGTTCTCATGGTTTATCACACTTTGGAGTATAATGTGTTGGGGGCTGCTGCGGGCGTCCTTGCTACTGGATGGAGGATTTACAGGGGCAAGGCTACTGGCAGAAACTTGGCTCAACGTGTTAGCAAGAACTGCTTCTTGCAAAAGTGGACAACCCATCGAACGCCGTGGGATGGGCCATCGCCGAGATGCTAAACCAACCCCAATTCCTCCAACAAGCCACCGAAGAACTCGACAAAAAGCTCTCCGCCTCCACCCAATTGCCCCTTTCAACCTCCCTCACATCGCGACCACAGACGCCGTCGTCGCCGCCTACCTCATCCCCGCTGGTAGCCACGTCCTCCTAAGCCGCCTCGGCCTCTGCCGGAACCCTAGAGTTCGGCCTGACCCGATGCAGTTTGACCCGACCCGTCATCTTCAAGATCCGGCCGCTGATTCAGGCCTGGGTGAACCTGATCTGAGGTTTATTACGTTCACCAGAGGACGTAGAGGGTGTATGGGCGACGCCCTTGGGACGGCGATTACGATGATGCTTTTGGCTAGGCTTGTGCAAGGATTTACTTGGCGGTTGCCTCCCGGTGTGGCGGCGCTTGAGTTGTCGGAGTCCGATCAGCTGTTTCTTAAGGATCCTCTGTTCGCATTAGCGCAGCCGAGGCTGCCGGAATCTCTGTACCCTAATTTTGAAATAGAGGCATGTTTGACTTGGCATAACTCAATTGCCACATACAATTAG 870 52.18 MLTKLWCRGHTLHVSSLFSNVVIPFVDTLMKSTVSSSVVLPKDPYNKFSWFITLWSIMCWGLLRASLLLDGGFTGARLLAETWLNVLARTASCKSGQPIERRGMGHRRDAKPTPIPPTSHRRTRQKALRLHPIAPFNLPHIATTDAVVAAYLIPAGSHVLLSRLGLCRNPRVRPDPMQFDPTRHLQDPAADSGLGEPDLRFITFTRGRRGCMGDALGTAITMMLLARLVQGFTWRLPPGVAALELSESDQLFLKDPLFALAQPRLPESLYPNFEIEACLTWHNSIATYN 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 26607140 26611699 + ClCG03G012860.1 Cla03g01235 269735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g01235 289 PRINTS E-class P450 group I signature 121 139 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01235 289 PRINTS E-class P450 group I signature 201 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01235 289 PRINTS E-class P450 group I signature 162 186 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01235 289 PRINTS E-class P450 group I signature 211 234 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01235 289 MobiDBLite consensus disorder prediction 100 115 - -
Cla03g01235 289 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 125 269 - -
Cla03g01235 289 PANTHER PHENYLALANINE N-MONOOXYGENASE 125 269 - -
Cla03g01235 289 MobiDBLite consensus disorder prediction 97 124 - -
Cla03g01235 289 Pfam Cytochrome P450 127 254 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01235 289 Gene3D Cytochrome P450 125 255 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla03g01235 289 SUPERFAMILY Cytochrome P450 127 264 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01235 Cla-Chr3:26607140 Cla03g01227 Cla-Chr3:26495066 3.07E-60 dispersed
Cla03g01234 Cla-Chr3:26598944 Cla03g01235 Cla-Chr3:26607140 2.36E-55 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g01235 - K12153 csv:101215668 275.789