Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g01291 ATGGAGAATCTTATGATGGTTGATGATGCTTTGGGAGATTGTTCGGATATGGAAGTTGATGATATAAGGTGTGATAATATTGCAGAGAAAGATGTTAGTGATGAAGAAATTGATGCAGAGGATCTGGAGAGGCGTATGTGGAAAGATAGGATCAAGCTTAAAAGGATTAAGGAAAGAGAGAAAATTGCTGCACAACAGGCTGCGGAGAAGCAGAAACCGAAGCAGACATCTGACCAGGCTCGAAGGAAGAAGATGTCTAGAGCTCAAGATGGGATTCTCAAATATATGCTGAAACTGATGGAAGTATGCAAAGCTCGGGGATTCGTATATGGCATTATACCTGAGAAGGGGAAACCAGTTAGTGGTGCTTCTGACAACATCCGAGCTTGGTGGAAAGAAAAAGTTAAATTTGACAAGAATGGACCAGCTGCTATAGCCAAGTATGAAGCAGAATGTCTTGCCAAAGGAGAGGCAGATGGAAATGGAAACGGTAACTCCCAGAGCGTTCTTCAAGACCTTCAGGATGCAACGCTCGGGTCTCTTTTGTCTTCTTTGATGCAACATTGCGATCCCCCTCAGCGGAAGTACCCGTTAGAAAAGGGGGTTCCTCCACCCTGGTGGCCCTCTGGGAATGAAGATTGGTGGGTAAAGCTTGGACTATCCCATGGCAATAGTCCTCCTTATAAGAAGCCACACGATTTGAAGAAGATGTGGAAAGTGGGGGTCTTAACAGCTGTAATAAAGCATATGTCACCTGATATTGCAAAGATAAGGAGGCACGTACGGCAGTCGAAGTGCTTACAAGACAAGATGACTGCAAAGGAGAGTGCAATTTGGTTAGGAGTTTTAAGCCGAGAGGAATCTCTAATTCGGCAACCGAGCAGTGATAATGGAGCTTCTGGAATAACAGAGACACCAGTAGGTGGTCGTGGTGAAAAGCAAGCTGCAGTAAGCAGTGAAAGTGACTATGATGTTGACCTTGCTGATGATGGTGTCGGGTCAGTTTCTTCTAAAGAGGACAGAAGACCACGATCCATGGATGTGGAGCCACCCAGTAATCTACCCAATAATGCTCCTCAACCTGCTGAAGGAAAGGAGCCAGGTGAAAAACAAAGGAGAAAAAGGCATCGTGGGGGCAGGACAAAGCCTATCGATCAAACACTGGCTCCCTCTCGAAACGAAGAAGAACCATGTGTCGAACCAAGAACTACTCAGCTCGATATTAACCATTCTAATGTACCATTAGATAGATTTGAAATTCCAGGAAACCAACAACAAAAGGATACTGTCACAGCTTTGAGGCCACTCGAGAAGGATTTGGATGTCCAATCAGAAGTACCAGCTCCTCCGTTCAACATGCTCTCGGTGCCATCCTCTGATAATATCAATATAATTTCCACTCAGAGCATGTATGTTGATGGAAGGCCTTTGTTGTATCCTGTAATGCAGAATCCTGAGGTGCAACATGAAAGTGCTTACAATATTTATAATCCATCGGTCGATTATAGATCCAATTTTGATATGCAGCATTCTCAATTTGTTAATGAGCCTCAAATGAGATTGGAGGAAGGATTACATATTCCGACACAACATAGAAACGATGGGACGGTAGGAGAAGAATTCAACTATGTAAAAGAAACGTTCAACACAGAACAAGATCGGCCTGTTGATGCACAGTTTGGATCACCAATCAACAGTCTATCATTAGATTATGGAGCATTTAACAGTCCATTCCATCTCGGGATCGACAGTTCAACCTCATTCGATGACTTGTTGGTTGATGACGATTTGATTCAATACTTCGGAGCATAA 1812 43.6 MENLMMVDDALGDCSDMEVDDIRCDNIAEKDVSDEEIDAEDLERRMWKDRIKLKRIKEREKIAAQQAAEKQKPKQTSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWWKEKVKFDKNGPAAIAKYEAECLAKGEADGNGNGNSQSVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPSGNEDWWVKLGLSHGNSPPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREESLIRQPSSDNGASGITETPVGGRGEKQAAVSSESDYDVDLADDGVGSVSSKEDRRPRSMDVEPPSNLPNNAPQPAEGKEPGEKQRRKRHRGGRTKPIDQTLAPSRNEEEPCVEPRTTQLDINHSNVPLDRFEIPGNQQQKDTVTALRPLEKDLDVQSEVPAPPFNMLSVPSSDNINIISTQSMYVDGRPLLYPVMQNPEVQHESAYNIYNPSVDYRSNFDMQHSQFVNEPQMRLEEGLHIPTQHRNDGTVGEEFNYVKETFNTEQDRPVDAQFGSPINSLSLDYGAFNSPFHLGIDSSTSFDDLLVDDDLIQYFGA 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27604275 27606086 - ClCG03G013440.1 Cla03g01291 269791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g01291 603 MobiDBLite consensus disorder prediction 289 402 - -
Cla03g01291 603 Coils Coil 39 59 - -
Cla03g01291 603 PANTHER ETHYLENE INSENSITIVE 3-LIKE 3 PROTEIN 1 602 - -
Cla03g01291 603 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 1 602 IPR006957 GO:0005634
Cla03g01291 603 MobiDBLite consensus disorder prediction 62 85 - -
Cla03g01291 603 Gene3D - 160 298 IPR023278 GO:0003700|GO:0005634
Cla03g01291 603 Gene3D - 74 152 IPR023278 GO:0003700|GO:0005634
Cla03g01291 603 MobiDBLite consensus disorder prediction 333 347 - -
Cla03g01291 603 Pfam Ethylene insensitive 3 40 287 IPR006957 GO:0005634
Cla03g01291 603 SUPERFAMILY DNA-binding domain of EIN3-like 168 290 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01291 Cla-Chr3:27604275 Cla08g00868 Cla-Chr8:21125416 5.71E-132 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
60839 PF04873 EIN3 4.10E-127 No_clan Cla TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g01291 K14514 - csv:101210347 1090.1