Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g01320 ATGAGGCCTGTCAAACGAGAACCCACCTCCAGCAGCCGCAGTAATCGGAGTAGAGGCGGAGGCGATGACGGCGCTGTCGATGCTGCGAGTTTAAGGGATATTAAGCGGGAGAGGGTTGCTCGGGTGCGAGAGAACTCCGGCGAAGACAATACGACTGAAGAAGAAGTGGGTCAGCAAGACTTGACAAAACGGCGGGTCCTTCGCTCTCGGTATCTCGCTGTCATTCATGAGATTAGTGAAAGAAGAGAGGATTTGTCGAAGGATCTGGATAAGTTTAATGTTATCATCAATGAGGTGGAAAAGTTGCACGAGCAAGTTCAAAAGCCAAGGGAACAAGTTGCAGATGCAGAAGCGTTGCAAGATATTGCAAACTCCCTCGTGACCTCTATTAGGTCTCAGTCAAATGAAGGTGTTACTCCATCAGATTTTGTCAGTTGTCTGCTCAGAGAGTTTGCTGACATTAACGTTAGTATGCAATCTGAAGAACAAGACCTGGTTTCTGTCAGTTGGAAAGATATTGGACTCAGTGTTTCGTCTATTTTCATGAATGGCCATGGATGCCGCACAATGCTTGGACCTATGAGCAATCAGTTGAAGCAGCGAAAGACTAATAATATTTCCAGGAAACGTTCCAGGCCTACTGAAAGTTCTAGACCTGCAGAGGTTGAAGATAATGGGTCCGAAGTAAAAACAGATACAGATAAGAACATGGGCATCATGTTTGGAATTTTGAGGAGGAATAAAACCGTTAAACTTGAACACTTGATATTGAATAGAAAGTCTTTTGCACAGACAGTAGAGAATTTATTTGCTCTGTCCTTTCTGGTTAAGGATGGTCGGGCTGAGATAACTATTGATAAAAATGGTTCTCACTTTGTGTCACCGAAGAATGCCCCTGCCCATAGTACCATTATGTCACATGAAGTTAATTACAGTCATTTTGTATTCAGATTCGATTACAAGGATTGGAAGCCAATGGTGGATATGGTACCAGTTGGAGAGGAGCTGATGCCCCACAGGAACATTCTGAACTCAGAGCAGGTGTCCCAAGCAGAAGCAACGGCGGATGATTCTGAAGCGGCAGCCTTACCGACTACACCAATCCGAAAGCTGTCAAGAAATCGAGGTTTAGTTATCCAAACCGTTGTTGAAGATTCTCCTGATAATGGTTCTCATTCAGGTGCGACTGCAATTTTGAGGTGCAAGAGAAAGCTTAGTCAAGGACTAGGGCTAAGTGAAACGAAGTTGATGGAAATTATGGAAGCAAGAACAAGAAGAGATAAACAAAGACTTGGCTCCAAGCTTGAAGGATCATCATCAATTTCTCCTGTTTTCATTTCAACAGTCAGCAATGGTGTCTGCTGGTCATCGGTTGTCGGTTAG 1383 44.18 MRPVKREPTSSSRSNRSRGGGDDGAVDAASLRDIKRERVARVRENSGEDNTTEEEVGQQDLTKRRVLRSRYLAVIHEISERREDLSKDLDKFNVIINEVEKLHEQVQKPREQVADAEALQDIANSLVTSIRSQSNEGVTPSDFVSCLLREFADINVSMQSEEQDLVSVSWKDIGLSVSSIFMNGHGCRTMLGPMSNQLKQRKTNNISRKRSRPTESSRPAEVEDNGSEVKTDTDKNMGIMFGILRRNKTVKLEHLILNRKSFAQTVENLFALSFLVKDGRAEITIDKNGSHFVSPKNAPAHSTIMSHEVNYSHFVFRFDYKDWKPMVDMVPVGEELMPHRNILNSEQVSQAEATADDSEAAALPTTPIRKLSRNRGLVIQTVVEDSPDNGSHSGATAILRCKRKLSQGLGLSETKLMEIMEARTRRDKQRLGSKLEGSSSISPVFISTVSNGVCWSSVVG 460
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28233850 28237526 + ClCG03G013690.2 Cla03g01320 269820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g01320 460 MobiDBLite consensus disorder prediction 208 231 - -
Cla03g01320 460 MobiDBLite consensus disorder prediction 191 233 - -
Cla03g01320 460 MobiDBLite consensus disorder prediction 28 60 - -
Cla03g01320 460 Pfam Nse4 C-terminal 250 337 IPR014854 -
Cla03g01320 460 PANTHER UNCHARACTERIZED 35 405 IPR027786 GO:0005634|GO:0006281|GO:0030915
Cla03g01320 460 MobiDBLite consensus disorder prediction 1 60 - -
Cla03g01320 460 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 35 405 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g01320 K22825 - csv:101220149 698.738