Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g01330 ATGACACGAGTTGAGGAGTTGTGGGAGCGCTTAGTTCGAGCAGCCTTAAGAAGAGACAGAATTGGCATTGATGCATATGGACGCCCTGAAAGTGGCATTGCTGGGAATGTACCATCTTCACTTGCAAACAATAGGGATATTGACGAAATCTTGAGAGCTGCTGATGAAATCCAAGATGAAGATCCCAATATCTCGAGGATATTATGTGAGCATGCGTATTCACTTGCGCAAAACCTGGATCCTAATAGTGAAGGAAGAGGTGTTTTGCAATTCAAAACTGGTTTGATGTCTGTCATTAAGCAAAAGCTAGCCAAGAGGGATGGTGGAACCATAGATAGAAGCCAGGACATTACTCGGTTGCAGGAGTTCTACAAACTATACCGAGAGAAAAATAATGTAGATAAGCTTCGGGAAGATGAAATGAAATTGAGGGAATCTGGTGCTTTTAGTGGTAATCTTGGAGAGTTGGAACGAAAAACGTTGAAGCGAAAAAAAGTCTTTGCAACCCTGAAAGTATTAGGAATGGTACTGGAGCAACTCAGTGATGCAATTCCTGAAGAGATGAAAAGACTCATGGAATCAGATGCAGCAATGACAGAGGACCTGATTGCATATAATATTATTCCATTAGATGCTCCTTCTATGACAAATGCTATTGGGTCCCTCGTTGAGGTGCAAGCAGCAGTGTCAGCTTTAAAGTATTTCAGTGGCCTTCCAAAGTTGCCCGCAGAATTTTCTGTTCCGGAGACTAGGAGTCCTGATATACTTGACTTTCTACACTTCATTTTTGGATTTCAGAAAGACAATGTGGCTAATCAGCGCGAACATGTAGTGCACCTACTTGCCAATGAACAATCTCGCCTTCGTATTCCTGAAGAAACTGAACCAAAGTTGGATGAAGCTGCTGTGGAGGGTGTTTTTAAGAAGTCTCTGGAAAACTACGTTAAATGGTGTGAATATTTATGCATTCAACCTGTTTGGAGCAGCTTGTCTGCTGTTAGCAAGGAAAAGAAGCTATTATTTATTTCCTTATACTTTCTTATATGGGGGGAAGCAGCCAACGTCAGATTTCTTCCAGAATGCTTATGCTACATATTTCACCATATGGTTCGGGAAATGGATGAGGTATTGAGGCATCAGATTGCGCAGCCGGCCAAGAGCTGTGAGTCTAAAGATGGTGTTTCTTTCCTTGATCAAGTTATCTGTCCTCTTTACGAGGTTATGGCTGCGGAAGCTGCAAACAATAATAATGGGCAGGCACCACATTCTGCATGGAGAAACTATGATGATTTTAACGAGTATTTCTGGTCACTTAGATGCTTTGACCTCAGTTGGCCATGGCACAAAGGCAAATCTTTTTTCCAAAAGCCAACACCAAAATCAAAGAATATGCTTGGTAGAAGTCGTCATCAAGGGAAAACGTCATTTGTTGAGCATCGGACGTTTCTTCATCTTTATCACAGTTTCCATCGTTTATGGATATTTTTGGTTATGATGTTCCAGGCTTTGACCATTGTTGCATTTAACAATGGAAGCTTTAATATGAAGACACTGCTCGAAGTTCTGAGTCTTGGTCCGACGTTTGTTGTAATGAAGTTTATTGAGAGTGTTCTAGACATCCTAATGATGTATGGTGCATACTCTACTTCAAGACGTCTTGCTGTCTCTCGAATTTTTCTTCGTTTTCTTTGGTTTAGTATTGCATCAGCTTCGATAACATTTCTTTATGTGAAGGCTCTTCAGGAGGGGAGTAAACCAAATGCAGAAAGAGTGATGTTTAGACTATATGTAATTGTGATTGGAATATATGGTGGTGTGCAGCTTTGTCTCAGTATCCTCATGCGTATACCTGCTTGCCATCTTTTAACGAATCAATGTGATCGGTGGCCTCTTGTGCGTTTTATCAAGTGGATGCGTCAGGAACGGTACTATGTTGGACGTGGGATGTATGAGAGGACTACTGACTTTATCAAATACATGCTTTTGTGGATTATCATTCTGGGTGGAAAATTTGCATTTGCCTATTTTCTTCAGATCAAGCCTCTTGTTGAACCTACCAGGCTTATTGTAAATATGAGAGATATAAGATATTCGTGGCATGACTTTGTGTCTAAAAATAATCATAATGCTTTGACTATTCTTAGCTTATGGGCCCCCGTGGTCGCTATTTATATCTTGGACGTTCATGTGTTCTATACTATTATATCGGCTATTTGGAGTTTCTTAATTGGGGCAAGAGACCGTCTTGGTGAGATTAGATCATTGGAAGCCCTACATAAGCTGTTCGAGCAGTTTCCTGGAGCTTTTATGGACACTCTACATGTTCCTCTCCAAGACAGGCTTGGGTTTTCAAATCGGTCTTCAAGTCAGGTTGTTGAGAAAGACAAGTTTGATGCTGCTCGATTTTCTCCTTTCTGGAATGAAATCATAGCAAGTTTACGGGAAGAAGATTATATTACAAATTTGGAAATGGAGTTACTTCAAATGCCTAAAAACAAGGGTAATCTTCCCATGGTTCAGTGGCCCCTTTTTCTTCTTGCCAGCAAGATATTTCTAGCTAAGGATATTGCTGTTGAGAGACGAGAGGTTGAAAGGGTATTTGAAGACATTCAAGCTAGTATAGCAAACAATTCCATTATAAATGACTTCCAGCTAAATAAGCTGCCACTTGTGATTACAAGAATAACTGCTCTGACGGGTATTCTGAAAGAGCCAGAAACTTCGGAGCTGGAAAAAGGGGCTGTTAAGGCTGTTCAAGATTTGTATGATGTTGTGCACTATGATATCCTTTTCGGTGACAAGAGGGGGCACTATGAAACATGGAACATATTAGTAAAAGCCAGAAATGAAGGTCGCTTGTTTACAAAGTTAAATTGGCCGAAAGATCCAGAATTGAAGTCACAAGTCAAAAGATTGCATTCCCTCTTAACCATTAAAGATTCAGCTTCAAATATTCCAGTTAATCTTGAGGCCCGACGAAGACTGCAATTCTTTACAAATTCACTTTTCATGGTGATGCCAACTCCAAAACCTGTTCGTCAGATGCTTTCCTTCAGTGTATTCACTCCATATTATTCCGAGACGGTGCTCTATAGTATGGGGGAACTCCTGAAGAAAAATGAGGATGGGATAACAACCTTGTTTTACTTGCAAAAAATTTATCCAGATGAATGGAAGAACTTTCTTGCTCGAATTGGCCGAGATGAGAATGAAGTTGACCCAGAATCGTTTGACAACCCTAATGACATCCTTGCACTGCGGTTTTGGGCCTCTTATCGGGGACAGACGTTAGCAAGAACTGTTCGTGGAATGATGTACTATAGGAAAGCTCTTATGCTGCAGACTTATTTAGAGAGAGGAACCTATGGAGATTTGGAAGCTGCCATTCCTTGTACTGATGCTACTGATACTCGAGGTTTCGATTTATCTCCTGAAGCACGTGCACAGGCAGATCTTAAATTTACATATGTTGTGACGTGTCAGATATATGGAAGACAAAGAGAACAACAAAAACCTGAGGCCTCTGACATTGCACTGCTCATGCAAAGGAATGAAGCCCTTCGTGTTGCATACATTGATGATATTGAAACCCTAAAGGATGGTAAGGTGCACAAAGAATTTTACTCAAAGCTTGTAAAGGCTGATATCAATGGAAAAGATAAGGAGATATATTCAATCAAATTGCCTGGAGATCCAAAGTTGGGTGAAGGAAAGCCTGAGAATCAAAATCATGCTATTGTTTTTACTCGTGGAAATGCTGTTCAGACAATTGATATGAATCAGGATAATTACTTTGAAGAAGCATTGAAGATGAGAAATCTTCTTGAGGAATTTGGTTGTGATCATGGTATTCGTCCTCCTACCATACTGGGTGTCAGGGAACATGTATTTACGGGGAGTGTTTCATCTCTTGCATCATTCATGTCAAATCAAGAAGCTAGTTTTGTGACTCTTGGTCAGCGTGTTCTGGCAAATCCCTTGAAAGTGCGTATGCATTATGGCCATCCAGATGTTTTTGATAGGGTTTTTCATCTAACACGAGGTGGCATCAGCAAGGCCTCCCGTGTTATCAACATTAGTGAAGATATCTTTGCAGGATTTAATACAACATTGAGGCAAGGGAACGTTACTCATCATGAGTATATTCAGGTCGGTAAAGGACGAGATGTTGGTCTTAACCAGATTGCTCTTTTCGAAGGAAAGGTTGCTGGTGGTAATGGAGAACAAGTTCTTAGCCGTGATGTATATAGGCTTGGCCAACTGTTTGATTTTTTCCGGATGATGTCATTCTATTTCACCACTGTTGGCTACTACTTTTGTACTATGTTAACGGTGCTGACTGTGTACATTTTTCTCTATGGAAAAGCATATTTGGCACTATCTGGAGTTGGTGAGACCATTGAAGATAGAGCTAATATTACAGATAATACGGCATTGTCAGCTGCTTTGAATACACAGTTCCTCATCCAAATTGGTATCTTCACTGCCGTGCCTATGATCTTGGGGTTCATATTGGAGCAAGGTTTCTTCAGGGCTATTGTCAGCTTCATAACCATGCAGCTTCAGCTTTGTTCTGTCTTCTTCACATTCTCTCTTGGCACAAAAACTCACTATTTTGGCCGAACAATTCTTCATGGTGGCGCGAAGTATCATGCAACTGGAAGGGGATTTGTGGTTCGCCATATCAAATTCTCTGAAAATTACAGATTGTACTCCCGCAGCCATTTTGTTAAAGGATTGGAAGTTGTGCTTCTGTTGGTTGTATACATGGCCTATGGATATAGTTCAGGTGGTTCGTTAGCATACATCCTTGTAACTCTTAGCAGTTGGTTCATGGCAATATCTTGGCTTTTTGCTCCCTATCTGTTCAACCCGTCAGGGTTTGAGTGGCAGAAGACCGTGGAGGATTTCAGGGAATGGACCAATTGGCTTTTTTACCGAGGTGGAATTGGTGTTAAGGGTGAAGAAAGTTGGGAAGCATGGTGGGACTCAGAACTGGTATATGGGTTCTCTTGGATTGTGTTAGCTGGGCTTATAGTTCTTTTCAAGGTGTTTACCTTCAGCCAAAAGATGACTGTCAATTTTCAGCTTTTGTTGCGATTTATCCAAGGTCTTTCTTTCCTTTTGACGCTAGCTGGCCTGGCAGTTGCTGTTGCTATTACAGATTTGTCACTGCCTGATGTGTTTGCTTGCATCTTGGCATTTGTACCTACAGGATGGGGCATTCTTTCTATTGCAGCAGCTTGGAAACCTTTAATAAAGAAACTGGGACTCTGGAAATCCATTCGCTCAATTGCTCGGCTGTATGATGCTGGGATGGGGATGCTCATCTTTATCCCCATTGCATTCCTTTCATGGTTTCCATTTGTATCGACATTTCAAACTCGTCTTATGTTCAACCAGGCTTTCAGTCGAGGGCTCGAGATCTCTCTAATTCTTGCTGGAAACAATCCCAACACTGCCTTATGA 5469 41.1 MTRVEELWERLVRAALRRDRIGIDAYGRPESGIAGNVPSSLANNRDIDEILRAADEIQDEDPNISRILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKRDGGTIDRSQDITRLQEFYKLYREKNNVDKLREDEMKLRESGAFSGNLGELERKTLKRKKVFATLKVLGMVLEQLSDAIPEEMKRLMESDAAMTEDLIAYNIIPLDAPSMTNAIGSLVEVQAAVSALKYFSGLPKLPAEFSVPETRSPDILDFLHFIFGFQKDNVANQREHVVHLLANEQSRLRIPEETEPKLDEAAVEGVFKKSLENYVKWCEYLCIQPVWSSLSAVSKEKKLLFISLYFLIWGEAANVRFLPECLCYIFHHMVREMDEVLRHQIAQPAKSCESKDGVSFLDQVICPLYEVMAAEAANNNNGQAPHSAWRNYDDFNEYFWSLRCFDLSWPWHKGKSFFQKPTPKSKNMLGRSRHQGKTSFVEHRTFLHLYHSFHRLWIFLVMMFQALTIVAFNNGSFNMKTLLEVLSLGPTFVVMKFIESVLDILMMYGAYSTSRRLAVSRIFLRFLWFSIASASITFLYVKALQEGSKPNAERVMFRLYVIVIGIYGGVQLCLSILMRIPACHLLTNQCDRWPLVRFIKWMRQERYYVGRGMYERTTDFIKYMLLWIIILGGKFAFAYFLQIKPLVEPTRLIVNMRDIRYSWHDFVSKNNHNALTILSLWAPVVAIYILDVHVFYTIISAIWSFLIGARDRLGEIRSLEALHKLFEQFPGAFMDTLHVPLQDRLGFSNRSSSQVVEKDKFDAARFSPFWNEIIASLREEDYITNLEMELLQMPKNKGNLPMVQWPLFLLASKIFLAKDIAVERREVERVFEDIQASIANNSIINDFQLNKLPLVITRITALTGILKEPETSELEKGAVKAVQDLYDVVHYDILFGDKRGHYETWNILVKARNEGRLFTKLNWPKDPELKSQVKRLHSLLTIKDSASNIPVNLEARRRLQFFTNSLFMVMPTPKPVRQMLSFSVFTPYYSETVLYSMGELLKKNEDGITTLFYLQKIYPDEWKNFLARIGRDENEVDPESFDNPNDILALRFWASYRGQTLARTVRGMMYYRKALMLQTYLERGTYGDLEAAIPCTDATDTRGFDLSPEARAQADLKFTYVVTCQIYGRQREQQKPEASDIALLMQRNEALRVAYIDDIETLKDGKVHKEFYSKLVKADINGKDKEIYSIKLPGDPKLGEGKPENQNHAIVFTRGNAVQTIDMNQDNYFEEALKMRNLLEEFGCDHGIRPPTILGVREHVFTGSVSSLASFMSNQEASFVTLGQRVLANPLKVRMHYGHPDVFDRVFHLTRGGISKASRVINISEDIFAGFNTTLRQGNVTHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDVYRLGQLFDFFRMMSFYFTTVGYYFCTMLTVLTVYIFLYGKAYLALSGVGETIEDRANITDNTALSAALNTQFLIQIGIFTAVPMILGFILEQGFFRAIVSFITMQLQLCSVFFTFSLGTKTHYFGRTILHGGAKYHATGRGFVVRHIKFSENYRLYSRSHFVKGLEVVLLLVVYMAYGYSSGGSLAYILVTLSSWFMAISWLFAPYLFNPSGFEWQKTVEDFREWTNWLFYRGGIGVKGEESWEAWWDSELVYGFSWIVLAGLIVLFKVFTFSQKMTVNFQLLLRFIQGLSFLLTLAGLAVAVAITDLSLPDVFACILAFVPTGWGILSIAAAWKPLIKKLGLWKSIRSIARLYDAGMGMLIFIPIAFLSWFPFVSTFQTRLMFNQAFSRGLEISLILAGNNPNTAL 1822
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28360532 28429034 + ClCG03G013800.2 Cla03g01330 269830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g01330 1822 Pfam 1,3-beta-glucan synthase component 985 1661 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Cla03g01330 1822 Gene3D - 33 187 IPR023175 -
Cla03g01330 1822 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1667 1821 - -
Cla03g01330 1822 PANTHER BNAC03G35120D PROTEIN 1 860 - -
Cla03g01330 1822 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 338 445 IPR026899 -
Cla03g01330 1822 PANTHER BNAC03G35120D PROTEIN 1667 1821 - -
Cla03g01330 1822 PANTHER BNAC03G35120D PROTEIN 861 1666 - -
Cla03g01330 1822 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 860 - -
Cla03g01330 1822 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 861 1666 - -
Cla03g01330 1822 SMART FKS1_dom1_2 336 448 IPR026899 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01330 Cla-Chr3:28360532 Cla06g01725 Cla-Chr6:30768245 1.23E-166 dispersed
Cla03g01335 Cla-Chr3:28576385 Cla03g01330 Cla-Chr3:28360532 0 dispersed
Cla03g01336 Cla-Chr3:28601545 Cla03g01330 Cla-Chr3:28360532 0 dispersed
Cla03g01330 Cla-Chr3:28360532 Cla03g01332 Cla-Chr3:28452952 0 proximal
Cla03g01329 Cla-Chr3:28328531 Cla03g01330 Cla-Chr3:28360532 0 tandem
Cla03g01330 Cla-Chr3:28360532 Cla03g01331 Cla-Chr3:28444839 2.41E-27 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g01330 K11000 - csv:101216435 3464.86