Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g01336 ATGCAGATGGTTCAGGAAATGGATGAAGTATTGAGGCATCGGATTGCGCAGCCAGCCAAGAGCTGTGAGTCTAAATATGGTGTTTCTTTCCTTGATCAAGAAGCTGCAAACAATAATAATGGGCAGGCACCATATTCTGCATGGAGAAACTATGATGATTTTAACGAGTCGCTTAGATGCTTTGACCTCAGTTGGCCATGGCATAAAGGCAAATCTTTTTTTCAAAAGCCAACACCAAAATCAAAGAGTATGCTTGGTAGAAGTCGTCATCAAGGGAAAACGTCATTTGTTGAGCATCGTACTTTTCTTCGTCTTTATCATAGTTTCCATCGTTTATGGATATTTTTGGTTATGACATTCCAGGCTCTGACCATTGTTGCATTTAACAATGGAAACTTTAATATGAAGACATGGCTGGAAGTTCTGAGTCTTGGTCCGACATTTGTTGTAATGAAGTTTATTGAGAGTGTTCTAGACATCCTAATGATGTATGGTGCATATTCTACTTCAAGGCGTATTTTTGTTTCTCGAATTCTTCTTCGTTTTCTTTGGTTCAGTATTGCATCAGCTTTGATAACATTTCTTTATGTGGAAGCTCTTCAGGAAAGGAGTAAACCAAATGCAGAAAGAGTGATGTTCAGACTATATGTAATTGTGATTGGAATATATGGTGGTGTACAGCTTTGTCCCAGTATCCTCATGCATATACCTGCTTGCCGTCTTTTAATGAATCAATGTGATTTGTGGCCTCTTGTTCGCTTTTTCAAGTGGATGCGTCAGGAACGGTACTATGTTGGAAGTGGGATGTATGAGAGGACTACTGACTTTATTAAATACATGCTTCTGTGGATTATCATTCTTGGTGGAAAACTTGCACTTGCTTATTTTCTTCAGATCAAGCCTCTTGTTGGACCTACAAGGCTTATTGTAAATAGGAGAGATATAAGATATTCGTGGCATGACTTTGTGTCTAAAGATAATCATAATGCATTGACTATTCTTAGCTTGTGGGCCCCCGTGATTTACATCTTGGACATCCATGTTTTCTATACTATTATATCGGCCATATGGAGTTTCTTAATTGGGGCAAGAGACCGTCTTGGAGAGATTAGATCATTAGAAGCCATACATAAACTGTTTAATCGGTTTCCTGGAGCTTTTATGGACACTCTACATGTTCCTCTCCAAGACAGGCTTGGTCTTTCAGAATGCTCCTTTGCACTTTGTTTCGGTGGTAGTCCTTTGGGTTGTAGCTACACTCTCCAAGATTTAACTCTTTTTAAAGATCTTCAAAGGTTGTTGGTTCATGTTGTTGAGAAAGACAAGTTTGATGCTGCTCGATTTTCTCCCTTCTGGAATGAAATCATAGCAAGTTTACGGGAAGAAGATTATATTACAAACTTGGAAATGGAGTTACTTCAAATGCCTAAAAACAATGGTAATCTTCCCATGGTTCAGTGGCCACTTTTTCTTCTTGTCAGCAAGATATCTCTAGCTAAGGATATTGCTGTTAAAAGACGAGATTCGCAAGACAAGCTGTGGAAGCATATTTCCAGAGATGACTATATGAAATATGCAGTACACGAATGTTACCACGCCATTAAGCTTATCTTAATGGAATTACTAGTTGGGGAAGGAAGGATGGTTGAAAGGGTATTTGAAGACACTGAAGCTAGTTTAGCAAACAATTCCATTCTAAATGACTTCCAGCTAAATAAGTTGCCACTTGTGATTACAAGAGTAACTGCTCTGATGGGTATTTTGAAAGAGCCAGAAACTTCGGAGCTGGAAAAAGAGGCTATTAAGGCTGTTCAAGATTTGTATGATGTTGTGCACCATGATCTCCTTTCCAGTGACAAGAGGGGGCACTATGAAACATGGAACATATTAGTAAAAGCCAGAAATGAAGGTCGTTTGTTTACAAAGTTAAATTGGCCCAAAGATTTAGAATTGAAGTCACAAGTCAAAAGATTGTATTCCTTGTTAACCATTAAAAAGACAACTTTAGATATTCCATTTAACTTTGAGGCCCAACGGAGACTGCAATTCTTTACAAATTCACTTTTCATGGTGATGCCAACTCCAAAACTTGTTCGTCAGATGCTTTCCTTCAGTGTATTCACTCCGTATTATTCTGAGACG 2142 38.47 MQMVQEMDEVLRHRIAQPAKSCESKYGVSFLDQEAANNNNGQAPYSAWRNYDDFNESLRCFDLSWPWHKGKSFFQKPTPKSKSMLGRSRHQGKTSFVEHRTFLRLYHSFHRLWIFLVMTFQALTIVAFNNGNFNMKTWLEVLSLGPTFVVMKFIESVLDILMMYGAYSTSRRIFVSRILLRFLWFSIASALITFLYVEALQERSKPNAERVMFRLYVIVIGIYGGVQLCPSILMHIPACRLLMNQCDLWPLVRFFKWMRQERYYVGSGMYERTTDFIKYMLLWIIILGGKLALAYFLQIKPLVGPTRLIVNRRDIRYSWHDFVSKDNHNALTILSLWAPVIYILDIHVFYTIISAIWSFLIGARDRLGEIRSLEAIHKLFNRFPGAFMDTLHVPLQDRLGLSECSFALCFGGSPLGCSYTLQDLTLFKDLQRLLVHVVEKDKFDAARFSPFWNEIIASLREEDYITNLEMELLQMPKNNGNLPMVQWPLFLLVSKISLAKDIAVKRRDSQDKLWKHISRDDYMKYAVHECYHAIKLILMELLVGEGRMVERVFEDTEASLANNSILNDFQLNKLPLVITRVTALMGILKEPETSELEKEAIKAVQDLYDVVHHDLLSSDKRGHYETWNILVKARNEGRLFTKLNWPKDLELKSQVKRLYSLLTIKKTTLDIPFNFEAQRRLQFFTNSLFMVMPTPKLVRQMLSFSVFTPYYSET 714
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28601545 28629520 + ClCG03G013920.1 Cla03g01336 269836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g01336 714 SMART FKS1_dom1_2 2 68 IPR026899 -
Cla03g01336 714 Pfam 1,3-beta-glucan synthase component 672 713 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Cla03g01336 714 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 436 713 - -
Cla03g01336 714 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 2 400 - -
Cla03g01336 714 PANTHER BNAC03G35120D PROTEIN 436 713 - -
Cla03g01336 714 PANTHER BNAC03G35120D PROTEIN 2 400 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01336 Cla-Chr3:28601545 Cla03g01330 Cla-Chr3:28360532 0 dispersed
Cla03g01332 Cla-Chr3:28452952 Cla03g01336 Cla-Chr3:28601545 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g01336 K11000 - csv:101216435 1152.5