Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g01337 ATGAGTTGTGGAGATTCACCGACAATGATTTCTCATTACGTTCATGTGTTCTTGCTGGCCCTTCTTTCTTTTGACCTCATTTCTACTTTTTTGTCCTACTTTTCATGGCAACTTTTTAAAAAAAACATTTGGATAGATGAGTGGAAGAACTTTCTTGCTCGAATTGGCCGAGATGAGAATGAAGTTGACCCAGAATCGTTTGATAATCCTAATGACATCCTTGCATTGCGATTTTGGGCCTCTTATCGAGGACAGACATTAGCAAGAACAGTTCGTGGAATGATGTACTATAGGAAAGCTCTTATGCTGCAGACTTATTTAGAGAGAGGAACTTATGGAGACTTCAAAGCTGCCATTCCTTGTACTGATGCTACTGATACTCGGGGTTTCGATTTATCTCCTGAAGCACGTGCACTAGCAGATCTTAAATTTACATATGTTGTGACATGTCAGATATATGGCAGACAAAGAGAACAACAAAAACCAGAGGCCGCTGACATTGCATTGCTTATGCAAAGAAATGAAGCCCTTCGTGTTGCCTACATCGATGATATTGAAACCCTGAAGGATGGTAAGGTGCACAAAGAATTTTACTCAAAGCTTGTAAAGGCTGATATCAATGGAAAAGATAAGGAGATATATTCAATCAAATTGCCTGGAGATCCAAAGTTGGGTGAAGGAAAGCCTGAGAATCAAAACCATGCTATTGTTTTTACTCGTGGAAATGCTATTCAGACAATTGATATGAATCAGGATAATTACTTTGAAGAAGCATTGAAGATGAGAAATCTTCTCGAGGAATTTGATCATTATCATGGTATTCGTCCTCCTACCATACTAGGTGTCAGGGAACATGTATTTACGGGGAGTGTTTCATCTCTTGCTTCATTCATGTCAAATCAAGAAGCTACTTTTGTGACTCTTGGTCAACGTATTCTGGCAAATCCCTTGAAAGTGCGTATGCATTATGGCCATCCAGATGTTTTTGATAGAGTTTTTCATCTAACACGAGGTGGCATCAGCAAGGCCTCCCGTGTTATCAACATTAGTGAAGATGTCTTTGCAGGATTTAATACAACATTGAGGCAAGGGAACGTTACTCATCATGAGTATATTCAGGTCGGTAAAGGACGAGATGTTGGTCTTAACCAGATTACTCTTTTCGAAAGAAAGGTTGCTGGTGGTAATGGAGAACAAGTTCTTAGCCGAGATGTATACAGGCTTGGCCAACTGTTTGATTTTTTCCGGATGATGTCATTCTATTTCACCACTGTTGGCTACTACTTTTGTACTATGTTAACAGTGCTAACTGTATACATTTTTCTCTATGGAAAAGCATATTTGGCACTATTTGGAGTTGGTGACACCATTGAAGATGGAGCTAATATTGCAAATATTATCACATTGTCAACTACTTTGAATACACAGTTCCTCATCCAAATTGGTATTTGCACTGTCGTGCCGATCTTAGGATTCATATCAGAGCAAGGTTTCTTCAAGACTATTGTCAGCTTCATAACCATGCAGCTTCAGCTTTGTTCTATCTTCTTCACATTCTCTCTTTGCACAAAAACTCACTATTTTGGCCGAACAATTCTTCATGGCGGTGCAAAGTATCAAGCAACTGGAAGGGGATTGGTGGTTCGCCATATCAAATTCTCTGAAAATTACAGATTGTACTCCCGCAGCCATTTTGTTAGAGGATTGGAAGCTGTGCTTCTGTTGGTTGTATACATGGCCTATGGATATAGTTCAGGTGGTTCATTAGCATACATCCTTGTAACTCTTAACACTTGGTTCATGGCAATATCTTGGCTTTTTGCTCCCTATCTGTTCAATCCATCTGGGTTTGAGTGGCAGAAGACTGTGGAGGATTTCAGGGAATGGACCAATTGGCTCTTTTACCGAGGTGGAGTTGGTGTTAAGGGTGAAGAAAGTTGGGAATCATGGTGGGACTCAGAACTGGTGTTTGCCTTCAGCCAGAAGATTTCGGTCAATTTTCAGTTTTTGTTGCGATTTATCCAAGGTCTTTTCTTCCTTTTGACACTGGCTGGCCTGGCAGTTGCATTTGCTATTATGGATTTGTCAATGTTTGATGTACTTGCTTGCATCTTGGCATTTGTACCTACAGGATGGGGCATTCTTTCTATTGCAGTAGCTTGGAAACCTTTAATAGAGAAACTTGGACTCTGGAAATCCATTTGCTCAATTGCTCGGCTGTACGATGCCGGGATGGGGATGCTCATCTTTATCCCCATTGCATGCCTTTCATGGCTTCCATTTGTATCAACATTCCAAAATTTTCTTATGTTCAACAAGGCTTTCAGTCGAGGGCTTGAGATCTGTCTAACTCTTGCTGGAAAAAAACCCAACACTGCACTATGA 2385 40.42 MSCGDSPTMISHYVHVFLLALLSFDLISTFLSYFSWQLFKKNIWIDEWKNFLARIGRDENEVDPESFDNPNDILALRFWASYRGQTLARTVRGMMYYRKALMLQTYLERGTYGDFKAAIPCTDATDTRGFDLSPEARALADLKFTYVVTCQIYGRQREQQKPEAADIALLMQRNEALRVAYIDDIETLKDGKVHKEFYSKLVKADINGKDKEIYSIKLPGDPKLGEGKPENQNHAIVFTRGNAIQTIDMNQDNYFEEALKMRNLLEEFDHYHGIRPPTILGVREHVFTGSVSSLASFMSNQEATFVTLGQRILANPLKVRMHYGHPDVFDRVFHLTRGGISKASRVINISEDVFAGFNTTLRQGNVTHHEYIQVGKGRDVGLNQITLFERKVAGGNGEQVLSRDVYRLGQLFDFFRMMSFYFTTVGYYFCTMLTVLTVYIFLYGKAYLALFGVGDTIEDGANIANIITLSTTLNTQFLIQIGICTVVPILGFISEQGFFKTIVSFITMQLQLCSIFFTFSLCTKTHYFGRTILHGGAKYQATGRGLVVRHIKFSENYRLYSRSHFVRGLEAVLLLVVYMAYGYSSGGSLAYILVTLNTWFMAISWLFAPYLFNPSGFEWQKTVEDFREWTNWLFYRGGVGVKGEESWESWWDSELVFAFSQKISVNFQFLLRFIQGLFFLLTLAGLAVAFAIMDLSMFDVLACILAFVPTGWGILSIAVAWKPLIEKLGLWKSICSIARLYDAGMGMLIFIPIACLSWLPFVSTFQNFLMFNKAFSRGLEICLTLAGKKPNTAL 794
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28642943 28659584 + ClCG03G013930.1 Cla03g01337 269837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g01337 794 PANTHER BNAC03G35120D PROTEIN 656 793 - -
Cla03g01337 794 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 37 655 - -
Cla03g01337 794 Pfam 1,3-beta-glucan synthase component 69 651 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Cla03g01337 794 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 656 793 - -
Cla03g01337 794 PANTHER BNAC03G35120D PROTEIN 37 655 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01337 Cla-Chr3:28642943 Cla06g01725 Cla-Chr6:30768245 0 dispersed
Cla03g01332 Cla-Chr3:28452952 Cla03g01337 Cla-Chr3:28642943 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g01337 K11000 - csv:101216435 1309.28