Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g01360 ATGGCCGAGGTTATGAACATGGCCGCCGCCGCCGCTGCCGCCGCCGAGTCGTTGGACCGCCGTCGTGATCGTCAAGAGAAATCGTCTGAGGAGCGACCTCATTCCTCGCCGCCGCCGCCGCCAGCTGCCGCTCCTCCTCCTCCCTCCAGAAGAAGGGATAGAGATGAGAGGGATAGGAGAGACGACCGGGATATTGATCGTCCTCCGAATCGACGCGGCGATAATTACGATCGTAATCGCTCTCCGCCTTCGCTGCCTCCGAGGGACAGAGATAGAGATAGAGATAGGGATTATAAACGTCGGAGCAGTCTTAGTCCTCCACCGCCTTACAGGGATCGGAGACACTCGCCTCCCAGACGGTCTCCTCCCCCACCTTACAAGCGTTCCAGGAGAGATGATGGTGGGTATGATGGAAGAAAGGGAAGCCCTAGAGGAGGTTTCGGGCCTGGCGATAGGAGGTTTGGTTATGATTATGGTGGGGGATATGAACGGGAAATGCGAGGCCGACCTGGATATGTTGATGAAAGACCTCTAGGTCGGTACATTGGTCGTTCATCTGGTGGCTATCAAGATTGGGATTCTAGTCGTGGTGGGCATGGTGATGCACTCAATGCAGGAGGTGGCCAAAGAGAAGGCTTGATGACATATAAGCAATTTATTCAAGAACTTGAAGATGATATACTACCTGCTGAAGCTGAGCGCAGATATCAAGAATACAAGTCAGAGTATATTACAACGCAGAAACAAGCTTTTTTTGATTCTCATAAGGATGAAGAATGGTTGAGAGACAAATATCATCCGACCAACCTCGTTACTGTCATTGAAAGGAGGAACGAACTTGCACAAAGAACTGCTAAGGATTTTTTGCTTGACCTGCAAAGTGGAACACTGGAATTAGGTCCAGGGATCAATGCAGCAGCTACAAATAAATCAGGGCAGGTTAGTGAACCAAATTCAGATGATGAAGCAGACAATGATGGCAAACGTAGGCGTCATGGTAGAGGACCGGCAAAAGAAATGGATCTTCTTTCTGCTGCTCCTAAGGCCCACCCTGTTAGTTCTGAACCAAGACGAATCCAGATTGACATTGAACAAGCTCAAGCTCTTGTCCGTAAACTTGATTCTGAGAAAGGAATAGAAGAAAATATTTTAAGTGGTTCTGACAGTGACAAACTAGGTCGGGAAAAAGCACATGGTGGCTCTTCTGGCCCAGTCATAATCATACGGGGGCTGACAACTGTCAAAGGCTTGGAGGGTGTTGAGCTATTGGACACACTTCTCACATATCTGTGGCGTATCCATGGTCTAGATTACTATGGAATGGTCGAGACAAGAGAAGCTAAGGGTCTTCGTCATGTAAGAGAAGAGGGGAAGAATTCTAACATAGCTGGTGGTGCGGATGAGTGGGAGAAGAAACTTGACTTACGTTGGCAAGAGAGATTGAGAGGTCAGGATCTGTTGGAAGTGATGACTGCCAAAGATAAAATAGAGGCTGCTGCTCTTGAAGCTTTTGATCCATATGTTCGCAAGATAAGAGATGAAAAATATGGATGGAAATATGGCTGTGGAGCCAAGGGTTGCACTAAGCTGTTTCATGCTCCCGAGTTTGTACATAAGCATCTTAACTTGAAACATCCAGAGCTTGTGATGGAGCTGACTTCAAAAGTGCGTGAAGAGCTGTATTTCCAAAATTACATGAAGGACACAGATGCTCCTGGAGGGACGCCTGTTATGCAGCAATCACTTCCGAAGGATAAGCCACAGAGACGTAGGATGAATTTAGATGGTCGGCTGAAGGATGATAGAGGCAATCGCAGGGACCGCGATAATTGGGCAAATGGGGGCGACAGATTTGATAGATCTGAGAACCCACAATCAACTGATTTCCAATCAGCAAATGATGGTACGGATGGTGGGAACATTGATGATCCTATGTTTGATACTTTTGGTGGACAAGGAAGACATGTTGCTCCTTTTGCCTCTGAAATACCACCGCCAGTGCTTATGCCGGTTCCTGGTGCTGGTCCATTAGGACCTTTTGTCCCTGCTCCGCCTGAAGTTGCAATGAGAATGTTGCGGGAACAAGGAGGTCCACCTCCTTTTGAGGGTGGTGGAAGAAATGGAAGGCCAGGACCTCAATTAGGTGGATCTGCTCCAATCCTTGCCCTATCTTCAGGTTTTCGACAGGATCCTCGTCGAATACGGAGTTATCAAGACCTAGATGCACCCGAGGACGAAGTCACTGTAATAGATTATAGAAGCTTGTAG 2268 47.97 MAEVMNMAAAAAAAAESLDRRRDRQEKSSEERPHSSPPPPPAAAPPPPSRRRDRDERDRRDDRDIDRPPNRRGDNYDRNRSPPSLPPRDRDRDRDRDYKRRSSLSPPPPYRDRRHSPPRRSPPPPYKRSRRDDGGYDGRKGSPRGGFGPGDRRFGYDYGGGYEREMRGRPGYVDERPLGRYIGRSSGGYQDWDSSRGGHGDALNAGGGQREGLMTYKQFIQELEDDILPAEAERRYQEYKSEYITTQKQAFFDSHKDEEWLRDKYHPTNLVTVIERRNELAQRTAKDFLLDLQSGTLELGPGINAAATNKSGQVSEPNSDDEADNDGKRRRHGRGPAKEMDLLSAAPKAHPVSSEPRRIQIDIEQAQALVRKLDSEKGIEENILSGSDSDKLGREKAHGGSSGPVIIIRGLTTVKGLEGVELLDTLLTYLWRIHGLDYYGMVETREAKGLRHVREEGKNSNIAGGADEWEKKLDLRWQERLRGQDLLEVMTAKDKIEAAALEAFDPYVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLNLKHPELVMELTSKVREELYFQNYMKDTDAPGGTPVMQQSLPKDKPQRRRMNLDGRLKDDRGNRRDRDNWANGGDRFDRSENPQSTDFQSANDGTDGGNIDDPMFDTFGGQGRHVAPFASEIPPPVLMPVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGPQLGGSAPILALSSGFRQDPRRIRSYQDLDAPEDEVTVIDYRSL 755
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29054236 29061041 + ClCG03G014170.2 Cla03g01360 269860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g01360 755 PANTHER ARSENITE-RESISTANCE PROTEIN 2 33 755 IPR039727 GO:0006397
Cla03g01360 755 Pfam Arsenite-resistance protein 2 454 658 IPR007042 -
Cla03g01360 755 MobiDBLite consensus disorder prediction 699 719 - -
Cla03g01360 755 ProSitePatterns Zinc finger C2H2 type domain signature. 522 545 IPR013087 -
Cla03g01360 755 MobiDBLite consensus disorder prediction 1 173 - -
Cla03g01360 755 MobiDBLite consensus disorder prediction 321 338 - -
Cla03g01360 755 Pfam SERRATE/Ars2, N-terminal domain 217 298 IPR021933 -
Cla03g01360 755 MobiDBLite consensus disorder prediction 16 33 - -
Cla03g01360 755 MobiDBLite consensus disorder prediction 48 139 - -
Cla03g01360 755 MobiDBLite consensus disorder prediction 584 616 - -
Cla03g01360 755 MobiDBLite consensus disorder prediction 567 650 - -
Cla03g01360 755 MobiDBLite consensus disorder prediction 303 358 - -
Cla03g01360 755 MobiDBLite consensus disorder prediction 157 173 - -
Cla03g01360 755 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 33 755 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g01360 - - csv:101219335 1183.32