Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g01434 ATGGCCCTCTCCATTTCTTCCACTGCTCTCTCGACCTTCCCAATCAGAGAAACATTTCACAGAGGACATTTTCCGGGAAAATTCCCAAATTATAAGCTCCGGCGAAATTACTCCGATTTTAAAGCTGCAAAGTCCGGCGTGTCCACCGTCTGTGAACCGCTCCCTCCCGACAGACCGCTCTGGTTCCCCGGCAGCAGCCCGCCGGAGTGGCTCGACGGCAGCCTCCCTGGCGATTTTGGCTTCGATCCGCTTGGATTGGGTTCTGACCCAGAGCTACTAAAATGGTTCGCACAAGCGGAGCTAATGCACGCAAGATGGGCAATGCTAGCCGTGGCCGGAATCCTACTGCCGGAATGGTTCGAAAGCTTAGGATTGATACAAAATTTCTCATGGTACGATGCCGGAGCGCGCGAGTATTTTGCAGACCCGACGACATTGCTGGTGGTGCAATTGGCATTGATGGGGTGGGTGGAGGGGCGGCGGTGGGCAGACTTGGTCAATCCGGGCAGCGTGGATGTTGACCTAAAGCTGCCCCACAAAAAGAAGGCAAAGCCAGACATGGGCTACCCGGGCGGGTTTTGGTTTGACCCCATGATGTGGGGCAGGGGCTCGCCGGAGCCGGTCATGGTGCTACGGACTAAAGAGATCAAGAATGGGCGGTTGGCCATGCTGGCGTTTGTCGGATTGTGGTTTCAAGCTATTTATACTGGCCAAGGGCCGCTGGAGAATCTGGCCGCCCACGTGGCTGATCCTGGCCATTGCAACATCTTTTCGGCATTTAGTTCGGGTTCGGGTTGA 798 55.64 MALSISSTALSTFPIRETFHRGHFPGKFPNYKLRRNYSDFKAAKSGVSTVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGAREYFADPTTLLVVQLALMGWVEGRRWADLVNPGSVDVDLKLPHKKKAKPDMGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFSAFSSGSG 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29922828 29925827 + ClCG03G014920.2 Cla03g01434 269934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g01434 265 Pfam Chlorophyll A-B binding protein 67 233 IPR022796 -
Cla03g01434 265 Gene3D Chlorophyll a/b binding protein domain 68 253 - -
Cla03g01434 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 260 IPR001344 GO:0009765|GO:0016020
Cla03g01434 265 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 6, CHLOROPLASTIC 1 260 - -
Cla03g01434 265 SUPERFAMILY Chlorophyll a-b binding protein 57 260 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01434 Cla-Chr3:29922828 Cla11g01337 Cla-Chr11:26824719 2.35E-102 dispersed
Cla03g01434 Cla-Chr3:29922828 Cla04g01190 Cla-Chr4:27061578 6.51E-62 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g01434 K08908 - csv:101211430 529.25