Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g01443 ATGGCTTCTCATTTTCTTCTTCTTCTTCTTCTTCTTCTTATTCCTTCTGTCTTTGTCGATGCCAAGAAAACTTACATTGTTCGTATGAAACATAATGCTCTGCCATCGGAGTATCTCACCCACCATGACTGGTACTCCGCTCATCTTCAATCTCTATCTTCATCTTCAACCTCCGATTCCCTTCTCTACACTTACACTTCCGCCTACCATGGCTTCGCTGCTTCTCTGGATTCAAATGAAGTAGAATTGCTCCGCCAATCCGATTCAGTTTTGGGTGTCTACGAAGACTCTGTTTACAATCTTCACACCACTCGCACTCCGGGATTCCTTGGTCTCAACTCCGATTTTGGGTTATGGGAAGGTCACAACACTCAGGATCTTAATCAAGCTTCTCACGATGTCATCATTGGGGTTCTCGATACTGGGATTTGGCCGGAATCGAAGAGCTTTGATGACACTGGAATGCCGGACATCCCATCACGGTGGCGTGGAGAATGTGAATCAGGACCCGATTTCAATCCTTCTCTCTGTAACAAGAAACTAATCGGAGCTCGTAGCTTCTCCAAGGGTTATCAAATGGCTTCCGGTGGTGGGTATTTCAGAAAACCTAGAGAAAACGAGTCGCCTCGAGATCAAGACGGACATGGAACGCACACAGCGAGCACAGCTGCTGGTTCACATGTGGCTAACGCGAGCTTACTTGGTTATGCAAGAGGCATTGCTAGAGGAATGGCTCCTCAAGCAAGAGTTGCTGCTTACAAGACTTGTTGGCCTACTGGTTGCTTCGGATCTGACATTCTCGCCGGTATGGATCGAGCGATATCCGACGGCGTCGATGTACTTTCACTCTCTTTAGGTGGTGGCTCTGCTCCCTATTACAGAGATACCATAGCAATTGGAGCATTTGCAGCCATGGAGAAGGGGGTTTTTGTTTCTTGCTCAGCTGGGAATAGTGGACCAAATAAGGCTTCTCTAGCCAATGTAGCACCGTGGATCATGACGGTCGGAGCCGGAACGCTCGACCGGGACTTCCCAGCTTATGTCCAGCTTGGAAATGGTAAACGCTTCACTGGAGTGTCGCTTTACAGTGGTCAAGGAATGGGGAATAAGGCAGTGGAATTGGTATACAACAAAGGAAGCAACACCTCCAGCAATATGTGCTTGCCGGGATCTCTCGACCCGGCGGTGGTTCGAGGGAAAGTGGTGGTTTGCGACCGAGGAATCAACGCCAGAGTAGAAAAGGGAGGAGTGGTGCGAGATGCAGGTGGGATTGGGATGATTCTTGCAAACACAGCAGCTAGTGGGGAGGAATTGGTGGCTGATAGTCACTTGCTGCCAGCCGTGGCGGTCGGGCGGAAAACCGGCGACTTGATCCGACAGTATGTTCGGTCAGCTTCGAATCCAACGGCTGTGCTGAGCTTTGGTGGGACAATTCTGAATGTCCGCCCATCTCCGGTGGTGGCGGCGTTTAGTTCTAGAGGACCCAACTTGGTAACTCCCCAAATCCTAAAGCCGGATGTTATTGGTCCTGGCGTTAATATCCTGGCTGCTTGGTCCGAGTCCATTGGACCTACCGGATTGGACAATGACAAAAGGAAAACTCAGTTCAATATCATGTCAGGAACTTCCATGTCTTGCCCACATATAAGTGGGTTGGCTGCATTGCTAAAGGCAGCTCATCCACAATGGAGTCCAAGTGCAATCAAATCCGCGTTAATGACAACCGCATACACACAGGACAACACCAACTCATCGCTCCGTGATGCAGCCGGAGGGGCGTTTTCCAATCCATGGGCTCATGGAGCTGGCCATGTTGATCCTCACAAAGCTCTATCCCCTGGCCTTCTATACGATATCTCGACTGATGATTACATTGCCTTCTTGTGCTCATTGGACTATGGGATCGATCATGTTCAAGCTATCGTGAAACGTTCGAACATAACTTGCTCTAGAAAGTTTGCCGATCCAGGACAACTTAACTACCCTTCGTTTTCAGTTGTGTTTGGGAGCAAGAGGGTTGTTCGGTACACTCGTATCGTCACCAATGTTGGCGCTGCAGGGTCGGTTTACGAAGTGGCTACTACTGCACCGTCTGTTGTGAAGGTGACTGTGAAACCTTCAAAACTTGTGTTCACTAAAGTTGGGGAGAGGAAGAGGTACACAGTTACGTTTGTGGCGAGTAGGGACGCTGCTCAAACGACGAGATTTGGGTTCGGTTCGATTGCGTGGAGCAATGACCAACACCAAGTTAGAAGCCCAGTGGCATTCGCTTGGACAAGGTTTTCCCATTCCTTCAACAAGCAAGGTGTGATGATCAGCAATCAGCAAAAGAGAATGATCATCTATGAGCAATCACCAAGTTGGGGAGAGTTAAAACTAATGTCGGCGCGGGTTGTGTGGGATGGTCAAGCGATCTTAGGAGGTTGCATTTTCTTCGAGAGGAGATGGGGTGGCGTTAGTTTTCTAGAATCTCAAGCTCTATTTAAAGGTCTAAAAATAGTCTATTAG 2508 48.8 MASHFLLLLLLLLIPSVFVDAKKTYIVRMKHNALPSEYLTHHDWYSAHLQSLSSSSTSDSLLYTYTSAYHGFAASLDSNEVELLRQSDSVLGVYEDSVYNLHTTRTPGFLGLNSDFGLWEGHNTQDLNQASHDVIIGVLDTGIWPESKSFDDTGMPDIPSRWRGECESGPDFNPSLCNKKLIGARSFSKGYQMASGGGYFRKPRENESPRDQDGHGTHTASTAAGSHVANASLLGYARGIARGMAPQARVAAYKTCWPTGCFGSDILAGMDRAISDGVDVLSLSLGGGSAPYYRDTIAIGAFAAMEKGVFVSCSAGNSGPNKASLANVAPWIMTVGAGTLDRDFPAYVQLGNGKRFTGVSLYSGQGMGNKAVELVYNKGSNTSSNMCLPGSLDPAVVRGKVVVCDRGINARVEKGGVVRDAGGIGMILANTAASGEELVADSHLLPAVAVGRKTGDLIRQYVRSASNPTAVLSFGGTILNVRPSPVVAAFSSRGPNLVTPQILKPDVIGPGVNILAAWSESIGPTGLDNDKRKTQFNIMSGTSMSCPHISGLAALLKAAHPQWSPSAIKSALMTTAYTQDNTNSSLRDAAGGAFSNPWAHGAGHVDPHKALSPGLLYDISTDDYIAFLCSLDYGIDHVQAIVKRSNITCSRKFADPGQLNYPSFSVVFGSKRVVRYTRIVTNVGAAGSVYEVATTAPSVVKVTVKPSKLVFTKVGERKRYTVTFVASRDAAQTTRFGFGSIAWSNDQHQVRSPVAFAWTRFSHSFNKQGVMISNQQKRMIIYEQSPSWGELKLMSARVVWDGQAILGGCIFFERRWGGVSFLESQALFKGLKIVY 835
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29980684 29984194 - ClCG03G015030.1 Cla03g01443 269943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g01443 835 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Cla03g01443 835 SUPERFAMILY Protease propeptides/inhibitors 23 100 - -
Cla03g01443 835 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 102 IPR037045 -
Cla03g01443 835 MobiDBLite consensus disorder prediction 195 222 - -
Cla03g01443 835 CDD Peptidases_S8_3 99 577 IPR034197 -
Cla03g01443 835 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Cla03g01443 835 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Cla03g01443 835 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Cla03g01443 835 Pfam Subtilase family 132 582 IPR000209 GO:0006508|GO:0008236
Cla03g01443 835 ProSiteProfiles Serine proteases, subtilase domain profile. 115 611 - -
Cla03g01443 835 Gene3D - 341 479 - -
Cla03g01443 835 Pfam PA domain 373 457 IPR003137 -
Cla03g01443 835 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 15 759 IPR045051 -
Cla03g01443 835 Gene3D - 628 758 - -
Cla03g01443 835 SUPERFAMILY Subtilisin-like 101 615 IPR036852 GO:0004252|GO:0006508
Cla03g01443 835 CDD PA_subtilisin_like 347 470 - -
Cla03g01443 835 Gene3D Peptidase S8/S53 domain 133 624 IPR036852 GO:0004252|GO:0006508
Cla03g01443 835 Pfam Peptidase inhibitor I9 24 102 IPR010259 -
Cla03g01443 835 Pfam Fibronectin type-III domain 658 755 IPR041469 -
Cla03g01443 835 PANTHER CUCUMISIN-RELATED 15 759 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01692 Cla-Chr1:31854378 Cla03g01443 Cla-Chr3:29980684 0 dispersed
Cla03g01443 Cla-Chr3:29980684 Cla08g01611 Cla-Chr8:28719089 0 dispersed
Cla08g01620 Cla-Chr8:28818168 Cla03g01443 Cla-Chr3:29980684 4.18E-173 dispersed
Cla07g00130 Cla-Chr7:1498129 Cla03g01443 Cla-Chr3:29980684 0 transposed
Cla11g01151 Cla-Chr11:24062722 Cla03g01443 Cla-Chr3:29980684 1.82E-96 transposed
Cla01g00326 Cla-Chr1:3538905 Cla03g01443 Cla-Chr3:29980684 0 transposed
Cla03g01443 Cla-Chr3:29980684 Cla09g00096 Cla-Chr9:943443 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g01443 - - csv:101209781 1416.36