Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla03g01445 ATGACGATGAAGAAGAAACTTTCATGGAGGTCATTTCTGCCGCCGATCTGCGGCGGGGAGTTGCCGGCGAAAGCGACGAAGAAGGTGGCGGCAAAACAAAGTTCATTCACGAGACTTTCCCAGCTTGATTTGAGCAACCCGAATTCTCTTCTCTCGGAGGATCTTTCCATATCTCTAGCCGGCTCTAACATTCATATGTTCACTTTGGGAGAGATTAAGCTGATGACACAAACTTTCTCCACCGGTAATTTCATCGGAGAAGGCGGGTTCGGACCCGTCTATAAAGGATTCATCGACGACAAGCTCCGCCCCGGCCTCAAGGCTCAACCTGTCGCCGTCAAGCTCTTGGACTTGGATGGCACTCAGGGCCACCGCGAGTGGTTGACGGAAGTGATATTTTTGGGACAATTACGAGATCCTCATTTGGTGAAATTGATTGGATATTGCTGTGAAGATGAACATAGAGTGTTGGTTTATGAGTACATGCCAAGAGGAAGTTTAGAGAATCAACTTTTTAGAAGATTTTCAGTGTCATTATCCTGGTCAACAAGAATGAAAATAGCTTTAGGAGCTGCCAAGGGATTGGCTTTCCTTCATGGAGCTGCAAAGCCAGTGATTTATAGAGATTTCAAAGCTTCCAACATCTTGTTAGATTCAGATTACAATGCAAAGCTTTCGGATTTTGGGTTGGCTAAAGATGGCCCTGATGGAGACGACACCCATGTCTCCACCAGGGTCATGGGAACTGAAGGTTACGCGGCTCCTGAATATGTTATGACGGGTCATTTGACCGCAATGAGTGACGTGTATAGTTTTGGAGTAGTATTGTTGGAGTTGTTGACTGGACGACGGTCGCTGGAGAGGAGCCGACCGCACCGGGAGCAGAATTTGGTTGAGTTTGCGCGGCCGATGTTGAATGACCACCGAAAGCTTTCTAGGATCATGGACACGAGGTTGGAAGGGCAGTACTCGGAGACTGGAGCAAGAAAGGCGGCGGCATTAGCGTACCAATGCTTAAGCCACCGCCCGAAGCAGCGGCCGACAATGAGCGAAGTGGTGAAAATCTTGGAGCCACTTAAGGACTACCAAGACATGCCCATTGGAACCTTTGTTTTCGAGATGCCCGAGAAGGCTCCGGCATCAAAGGGAAGCGAAACTCCAAAAAGAGAAGAAAAGAGAGAGAACAATGGAAGGCAGCAAAATGGCCACCATAGACAAAATCATCATCTTCGAAACCCTCGATCGCCAAATTCGTTGCCGGAAAATGGGGTGAGCAATGGCAACCGACGGCCGACGAGCTCGCCCTTGCACCCGAGATCAGCCGGTGGCCGGAGACCATAG 1341 49.29 MTMKKKLSWRSFLPPICGGELPAKATKKVAAKQSSFTRLSQLDLSNPNSLLSEDLSISLAGSNIHMFTLGEIKLMTQTFSTGNFIGEGGFGPVYKGFIDDKLRPGLKAQPVAVKLLDLDGTQGHREWLTEVIFLGQLRDPHLVKLIGYCCEDEHRVLVYEYMPRGSLENQLFRRFSVSLSWSTRMKIALGAAKGLAFLHGAAKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPDGDDTHVSTRVMGTEGYAAPEYVMTGHLTAMSDVYSFGVVLLELLTGRRSLERSRPHREQNLVEFARPMLNDHRKLSRIMDTRLEGQYSETGARKAAALAYQCLSHRPKQRPTMSEVVKILEPLKDYQDMPIGTFVFEMPEKAPASKGSETPKREEKRENNGRQQNGHHRQNHHLRNPRSPNSLPENGVSNGNRRPTSSPLHPRSAGGRRP 446
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 30012403 30014032 - ClCG03G015050.2 Cla03g01445 269945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla03g01445 446 MobiDBLite consensus disorder prediction 372 446 - -
Cla03g01445 446 ProSiteProfiles Protein kinase domain profile. 79 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla03g01445 446 MobiDBLite consensus disorder prediction 412 435 - -
Cla03g01445 446 SUPERFAMILY Protein kinase-like (PK-like) 64 376 IPR011009 -
Cla03g01445 446 MobiDBLite consensus disorder prediction 382 401 - -
Cla03g01445 446 Pfam Protein tyrosine and serine/threonine kinase 82 356 IPR001245 GO:0004672|GO:0006468
Cla03g01445 446 Gene3D Phosphorylase Kinase; domain 1 45 161 - -
Cla03g01445 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Cla03g01445 446 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 25 402 - -
Cla03g01445 446 Gene3D Transferase(Phosphotransferase) domain 1 162 368 - -
Cla03g01445 446 PANTHER OS01G0588500 PROTEIN-RELATED 25 402 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla03g01445 Cla11g00133 CCT
Cla03g01445 Cla11g00133 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01445 Cla-Chr3:30012403 Cla05g01635 Cla-Chr5:27790343 3.41E-161 dispersed
Cla07g01069 Cla-Chr7:27292105 Cla03g01445 Cla-Chr3:30012403 2.25E-131 dispersed
Cla11g01094 Cla-Chr11:22362922 Cla03g01445 Cla-Chr3:30012403 8.77E-145 transposed
Cla11g01329 Cla-Chr11:26771565 Cla03g01445 Cla-Chr3:30012403 3.50E-28 transposed
Cla11g00133 Cla-Chr11:1671135 Cla03g01445 Cla-Chr3:30012403 0 wgd
Cla03g01445 Cla-Chr3:30012403 Cla09g00094 Cla-Chr9:914110 3.13E-158 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80451 PF07714 PK_Tyr_Ser-Thr 9.60E-46 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla03g01445 - - csv:101209291 780.785